Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RPL23AP92-201ENST00000603609 255 ntBASIC4.92□□□□□ -1.62
TRIM48Q8IWZ4 AC013553.2-201ENST00000604244 589 ntBASIC4.92□□□□□ -1.62
TRIM48Q8IWZ4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM48Q8IWZ4 AL354950.2-201ENST00000617939 290 ntBASIC4.92□□□□□ -1.62
TRIM48Q8IWZ4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM48Q8IWZ4 AP001784.1-201ENST00000624107 428 ntBASIC4.92□□□□□ -1.62
TRIM48Q8IWZ4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM48Q8IWZ4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM48Q8IWZ4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM48Q8IWZ4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM48Q8IWZ4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
TRIM48Q8IWZ4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM48Q8IWZ4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM48Q8IWZ4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC004817.4-201ENST00000602396 3625 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 NACAP2-201ENST00000318548 624 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 RN7SKP104-201ENST00000362605 328 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 Y_RNA.58-201ENST00000362807 102 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 RNU6-97P-201ENST00000363387 104 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 Y_RNA.154-201ENST00000363624 102 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 RNY3P1-201ENST00000365085 102 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 RNY3-201ENST00000365484 102 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 SNORD82-201ENST00000365530 70 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 SNORA51.8-201ENST00000384234 132 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 Y_RNA.490-201ENST00000384413 102 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 SNORA70.10-201ENST00000384515 134 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AL109941.1-201ENST00000401925 229 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AL356432.1-201ENST00000405809 419 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AL353678.1-201ENST00000422735 741 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 COX6CP13-201ENST00000428703 226 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC105402.2-201ENST00000438503 358 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 CBWD4P-201ENST00000445695 655 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC104651.2-201ENST00000447549 528 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 IGHV5-78-201ENST00000450948 295 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 snoU13.8-201ENST00000458890 104 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 RNU6-261P-201ENST00000459506 102 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 RPL35AP28-201ENST00000459730 331 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AP001992.1-205ENST00000462248 379 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 HMGN1P10-201ENST00000474557 553 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 RPL23AP72-201ENST00000492447 435 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AK3P4-201ENST00000504283 583 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 PCBP2P3-201ENST00000509726 843 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 SCARNA24.1-201ENST00000516465 137 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 RNA5SP43-201ENST00000516559 110 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC078814.3-201ENST00000553036 491 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 NDUFB4P11-201ENST00000560510 395 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC022884.2-201ENST00000578535 580 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC060771.1-201ENST00000582031 164 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC098848.2-201ENST00000588023 330 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 YWHAQP7-201ENST00000603536 658 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC100827.5-201ENST00000615883 426 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC233309.1-201ENST00000619522 751 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC019206.1-201ENST00000621938 425 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC090574.1-201ENST00000623186 233 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 ELL2P4-201ENST00000446870 1376 ntBASIC4.91□□□□□ -1.62
TRIM48Q8IWZ4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM48Q8IWZ4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM48Q8IWZ4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM48Q8IWZ4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
TRIM48Q8IWZ4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM48Q8IWZ4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
TRIM48Q8IWZ4 RPL7P26-201ENST00000333817 754 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 RN7SKP95-201ENST00000362860 303 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 Y_RNA.548-201ENST00000384656 105 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 RPL7P60-201ENST00000397636 735 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms