Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MTCYBP20-201ENST00000524239 1129 ntBASIC1.93□□□□□ -2.1
VPS13CQ709C8 GNAI2P1-201ENST00000541815 315 ntBASIC1.93□□□□□ -2.1
VPS13CQ709C8 RMST_9.1-201ENST00000619945 193 ntBASIC1.93□□□□□ -2.1
VPS13CQ709C8 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS13CQ709C8 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13CQ709C8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13CQ709C8 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
VPS13CQ709C8 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC1.93□□□□□ -2.1
VPS13CQ709C8 AC122134.1-201ENST00000565664 1104 ntBASIC1.93□□□□□ -2.1
VPS13CQ709C8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13CQ709C8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13CQ709C8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC1.93□□□□□ -2.1
VPS13CQ709C8 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
VPS13CQ709C8 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13CQ709C8 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13CQ709C8 HMGB3P23-201ENST00000414981 585 ntBASIC1.93□□□□□ -2.1
VPS13CQ709C8 AL353705.4-201ENST00000449661 238 ntBASIC1.93□□□□□ -2.1
VPS13CQ709C8 AP000942.1-201ENST00000463969 747 ntBASIC1.93□□□□□ -2.1
VPS13CQ709C8 RAD51AP1P1-201ENST00000484195 1001 ntBASIC1.93□□□□□ -2.1
VPS13CQ709C8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS13CQ709C8 RN7SKP282-201ENST00000516824 299 ntBASIC1.93□□□□□ -2.1
VPS13CQ709C8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS13CQ709C8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS13CQ709C8 AL360085.1-201ENST00000604713 532 ntBASIC1.93□□□□□ -2.1
VPS13CQ709C8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VPS13CQ709C8 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VPS13CQ709C8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VPS13CQ709C8 EI24P2-201ENST00000397776 1076 ntBASIC1.92□□□□□ -2.1
VPS13CQ709C8 AL034379.1-201ENST00000423216 253 ntBASIC1.92□□□□□ -2.1
VPS13CQ709C8 AC108667.1-201ENST00000428618 249 ntBASIC1.92□□□□□ -2.1
VPS13CQ709C8 AL365396.1-201ENST00000430854 671 ntBASIC1.92□□□□□ -2.1
VPS13CQ709C8 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC1.92□□□□□ -2.1
VPS13CQ709C8 AL356266.1-201ENST00000623311 483 ntBASIC1.92□□□□□ -2.1
VPS13CQ709C8 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VPS13CQ709C8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VPS13CQ709C8 RNU1-75P-201ENST00000347264 129 ntBASIC1.92□□□□□ -2.1
VPS13CQ709C8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.92□□□□□ -2.1
VPS13CQ709C8 RNA5SP270-201ENST00000411361 118 ntBASIC1.92□□□□□ -2.1
VPS13CQ709C8 RHEBP3-201ENST00000411920 351 ntBASIC1.92□□□□□ -2.1
VPS13CQ709C8 COX6CP2-201ENST00000444980 225 ntBASIC1.92□□□□□ -2.1
VPS13CQ709C8 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.92□□□□□ -2.1
VPS13CQ709C8 WISP1-OT1-201ENST00000602893 642 ntBASIC1.92□□□□□ -2.1
VPS13CQ709C8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VPS13CQ709C8 MIR221-201ENST00000385135 110 ntBASIC1.92□□□□□ -2.1
VPS13CQ709C8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.92□□□□□ -2.1
VPS13CQ709C8 AL590399.6-201ENST00000446396 307 ntBASIC1.92□□□□□ -2.1
VPS13CQ709C8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
VPS13CQ709C8 AC092436.3-201ENST00000511788 257 ntBASIC1.92□□□□□ -2.1
VPS13CQ709C8 TRMT112P2-201ENST00000512910 132 ntBASIC1.92□□□□□ -2.1
VPS13CQ709C8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.92□□□□□ -2.1
VPS13CQ709C8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
VPS13CQ709C8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13CQ709C8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13CQ709C8 EIF5P1-201ENST00000400019 1231 ntBASIC1.91□□□□□ -2.1
VPS13CQ709C8 AC103975.1-201ENST00000482506 483 ntBASIC1.91□□□□□ -2.1
VPS13CQ709C8 SNORA9.3-201ENST00000516383 129 ntBASIC1.91□□□□□ -2.1
VPS13CQ709C8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.91□□□□□ -2.1
VPS13CQ709C8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13CQ709C8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13CQ709C8 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC1.91□□□□□ -2.1
VPS13CQ709C8 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.91□□□□□ -2.1
VPS13CQ709C8 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13CQ709C8 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13CQ709C8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.91□□□□□ -2.1
VPS13CQ709C8 FABP5P13-201ENST00000452144 328 ntBASIC1.91□□□□□ -2.1
VPS13CQ709C8 AC080013.2-201ENST00000460866 323 ntBASIC1.91□□□□□ -2.1
VPS13CQ709C8 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC1.91□□□□□ -2.1
VPS13CQ709C8 AC008121.2-201ENST00000614647 523 ntBASIC1.91□□□□□ -2.1
VPS13CQ709C8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
VPS13CQ709C8 PHKBP1-201ENST00000450951 1951 ntBASIC1.91□□□□□ -2.1
VPS13CQ709C8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13CQ709C8 AL359715.4-201ENST00000606629 1436 ntBASIC1.91□□□□□ -2.1
VPS13CQ709C8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13CQ709C8 RAD1P1-201ENST00000231383 813 ntBASIC1.9□□□□□ -2.1
VPS13CQ709C8 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.9□□□□□ -2.1
VPS13CQ709C8 RNU1-73P-201ENST00000383971 164 ntBASIC1.9□□□□□ -2.1
VPS13CQ709C8 AC105402.2-201ENST00000438503 358 ntBASIC1.9□□□□□ -2.1
VPS13CQ709C8 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.9□□□□□ -2.1
VPS13CQ709C8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.9□□□□□ -2.1
VPS13CQ709C8 AC135628.1-201ENST00000568867 534 ntBASIC1.9□□□□□ -2.1
VPS13CQ709C8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC1.9□□□□□ -2.1
VPS13CQ709C8 SNORA41-201ENST00000384675 132 ntBASIC1.9□□□□□ -2.11
VPS13CQ709C8 RPS20P25-201ENST00000412447 352 ntBASIC1.9□□□□□ -2.11
VPS13CQ709C8 BTF3P4-201ENST00000418852 495 ntBASIC1.9□□□□□ -2.11
VPS13CQ709C8 Z82205.1-201ENST00000428456 297 ntBASIC1.9□□□□□ -2.11
VPS13CQ709C8 ELOCP13-201ENST00000443934 329 ntBASIC1.9□□□□□ -2.11
VPS13CQ709C8 AC100870.1-201ENST00000522035 505 ntBASIC1.9□□□□□ -2.11
VPS13CQ709C8 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13CQ709C8 RPS3AP4-201ENST00000555161 764 ntBASIC1.9□□□□□ -2.11
VPS13CQ709C8 AL022099.1-201ENST00000604551 712 ntBASIC1.9□□□□□ -2.11
VPS13CQ709C8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC1.9□□□□□ -2.11
VPS13CQ709C8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
VPS13CQ709C8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13CQ709C8 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13CQ709C8 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13CQ709C8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13CQ709C8 Y_RNA.122-201ENST00000363331 96 ntBASIC1.9□□□□□ -2.11
VPS13CQ709C8 AC107081.1-201ENST00000414975 361 ntBASIC1.9□□□□□ -2.11
VPS13CQ709C8 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS13CQ709C8 RPS26P30-201ENST00000443431 335 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms