Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
CTR9Q6PD62 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTR9Q6PD62 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTR9Q6PD62 SNORA72.3-201ENST00000365074 132 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.04□□□□□ -1.76
CTR9Q6PD62 MTND4P3-201ENST00000417829 541 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 AL449283.1-202ENST00000418249 604 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 OR1AA1P-201ENST00000419597 916 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 SFR1P2-201ENST00000421841 730 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.04□□□□□ -1.76
CTR9Q6PD62 AL357552.1-201ENST00000445254 415 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.04□□□□□ -1.76
CTR9Q6PD62 FCF1P3-201ENST00000496394 590 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.04□□□□□ -1.76
CTR9Q6PD62 AC113420.1-201ENST00000507903 571 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 AC010265.1-201ENST00000513509 211 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 snoZ278.1-201ENST00000517059 112 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 OR4R3P-201ENST00000525084 838 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 AP001636.2-201ENST00000525517 696 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTR9Q6PD62 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.04□□□□□ -1.76
CTR9Q6PD62 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.04□□□□□ -1.76
CTR9Q6PD62 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.04□□□□□ -1.76
CTR9Q6PD62 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.04□□□□□ -1.76
CTR9Q6PD62 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.04□□□□□ -1.76
CTR9Q6PD62 AC112220.2-201ENST00000605513 533 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 AL365400.2-201ENST00000605604 902 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 AP004247.3-201ENST00000608682 624 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 AL050303.3-201ENST00000613704 284 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.04□□□□□ -1.76
CTR9Q6PD62 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CTR9Q6PD62 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTR9Q6PD62 AC007256.1-201ENST00000392253 2765 ntBASIC4.04□□□□□ -1.76
CTR9Q6PD62 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.04□□□□□ -1.76
CTR9Q6PD62 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.04□□□□□ -1.76
CTR9Q6PD62 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTR9Q6PD62 MTND5P1-201ENST00000445440 1375 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTR9Q6PD62 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTR9Q6PD62 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CTR9Q6PD62 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CTR9Q6PD62 ANKRD36P1-201ENST00000344424 659 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 SNORA31-201ENST00000362607 130 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 RNU6-619P-201ENST00000365146 108 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 MIR16-1-201ENST00000385271 89 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 MTCO1P56-201ENST00000401674 224 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 RNU6-584P-201ENST00000410350 95 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 RNA5SP120-201ENST00000410900 112 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 OR51A3P-201ENST00000413596 924 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 Z99755.1-201ENST00000414048 380 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.03□□□□□ -1.76
CTR9Q6PD62 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 GTF2IP3-201ENST00000433887 494 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 AC004865.1-201ENST00000442276 1003 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.03□□□□□ -1.76
CTR9Q6PD62 RAB11AP1-201ENST00000442978 646 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CTR9Q6PD62 SLC31A1P1-201ENST00000451221 567 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CTR9Q6PD62 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTR9Q6PD62 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.03□□□□□ -1.76
CTR9Q6PD62 AF279873.1-201ENST00000523393 313 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 AP001372.4-201ENST00000524889 472 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CTR9Q6PD62 AC005476.1-201ENST00000554427 397 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 AL049838.1-201ENST00000563647 981 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 MIR4509-3-201ENST00000578671 94 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 MIR4509-2-201ENST00000583920 94 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTR9Q6PD62 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.03□□□□□ -1.76
CTR9Q6PD62 AL160237.3-201ENST00000604114 1013 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 MIR4509-1-201ENST00000618224 94 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 AC243756.2-201ENST00000618406 463 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 AC023510.2-201ENST00000622162 746 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 AL109659.3-201ENST00000624985 950 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.03□□□□□ -1.76
CTR9Q6PD62 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTR9Q6PD62 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTR9Q6PD62 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.03□□□□□ -1.76
CTR9Q6PD62 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
CTR9Q6PD62 SGO1P1-201ENST00000603525 1447 ntBASIC4.03□□□□□ -1.76
CTR9Q6PD62 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.03□□□□□ -1.76
CTR9Q6PD62 AC058791.1-201ENST00000608412 3198 ntBASIC4.02□□□□□ -1.77
CTR9Q6PD62 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CTR9Q6PD62 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTR9Q6PD62 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTR9Q6PD62 RNA5SP189-201ENST00000364920 115 ntBASIC4.02□□□□□ -1.77
CTR9Q6PD62 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.02□□□□□ -1.77
CTR9Q6PD62 PRRC2CP1-201ENST00000404428 159 ntBASIC4.02□□□□□ -1.77
CTR9Q6PD62 AP000567.1-201ENST00000406413 156 ntBASIC4.02□□□□□ -1.77
CTR9Q6PD62 HNRNPDP2-201ENST00000406475 478 ntBASIC4.02□□□□□ -1.77
CTR9Q6PD62 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.02□□□□□ -1.77
CTR9Q6PD62 MTCYBP42-201ENST00000444653 1130 ntBASIC4.02□□□□□ -1.77
CTR9Q6PD62 AL606517.1-201ENST00000446914 387 ntBASIC4.02□□□□□ -1.77
CTR9Q6PD62 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.02□□□□□ -1.77
CTR9Q6PD62 AL009048.1-201ENST00000450437 298 ntBASIC4.02□□□□□ -1.77
CTR9Q6PD62 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTR9Q6PD62 BX510359.1-201ENST00000456973 237 ntBASIC4.02□□□□□ -1.77
CTR9Q6PD62 AC092754.2-201ENST00000463506 460 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms