Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CDC42P4-201ENST00000510507 563 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC006499.6-201ENST00000511169 607 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 RNA5SP446-201ENST00000515955 82 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC022616.6-201ENST00000520479 119 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC018630.1-201ENST00000541376 925 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 MTND1P15-201ENST00000579262 949 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 CKS1BP3-201ENST00000600888 237 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 XIAPP1-201ENST00000603162 600 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC090578.1-201ENST00000604955 591 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC121334.2-201ENST00000605387 271 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 NDUFA8P1-201ENST00000605525 367 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC012150.2-201ENST00000621300 544 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 ZFRP1-201ENST00000457579 2970 ntBASIC4.43□□□□□ -1.7
RNF220Q5VTB9 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF220Q5VTB9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 RNA5SP305-201ENST00000362665 119 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 Y_RNA.517-201ENST00000384551 106 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 MTND1P21-201ENST00000412991 285 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 CCDC58P2-201ENST00000417131 366 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 RPL7P57-201ENST00000423238 740 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC233728.2-201ENST00000425348 757 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 USP9YP7-201ENST00000436723 430 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AL049734.2-201ENST00000441066 616 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 HMGN2P21-201ENST00000447764 270 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC010655.1-201ENST00000449336 292 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 USP9YP32-201ENST00000452432 430 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 TPT1P7-201ENST00000458300 517 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 RPS26P15-201ENST00000488067 348 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC055855.1-201ENST00000489563 579 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 RN7SKP298-201ENST00000515950 94 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 Vault.1-201ENST00000516474 102 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC090151.1-201ENST00000520784 730 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 MTCYBP20-201ENST00000524239 1129 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AP003392.2-201ENST00000527269 208 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC123904.2-201ENST00000548059 300 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC020910.3-201ENST00000603701 874 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC091805.2-201ENST00000603848 235 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AL136363.2-201ENST00000604173 851 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC103710.1-201ENST00000610003 901 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AL355472.4-201ENST00000610233 626 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AL589743.7-201ENST00000612637 233 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC015540.1-201ENST00000615828 501 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AP002799.1-201ENST00000623552 423 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AL049536.1-201ENST00000625043 744 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AL355480.1-201ENST00000629041 99 ntBASIC4.42□□□□□ -1.7
RNF220Q5VTB9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF220Q5VTB9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms