Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
VARS2Q5ST30 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
VARS2Q5ST30 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VARS2Q5ST30 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.86□□□□□ -1.31
VARS2Q5ST30 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VARS2Q5ST30 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARS2Q5ST30 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VARS2Q5ST30 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARS2Q5ST30 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VARS2Q5ST30 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARS2Q5ST30 AP000866.6-201ENST00000638898 3579 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VARS2Q5ST30 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VARS2Q5ST30 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARS2Q5ST30 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARS2Q5ST30 SNORD73B-201ENST00000364394 72 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 Y_RNA.262-201ENST00000364641 102 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 RN7SKP69-201ENST00000365390 305 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 Y_RNA.480-201ENST00000384364 102 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 Y_RNA.571-201ENST00000384753 98 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 MIR640-201ENST00000385086 96 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 Y_RNA.623-201ENST00000411128 95 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 RPL23AP38-201ENST00000423801 469 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 HMGB3P24-201ENST00000433260 622 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 AL512844.2-201ENST00000433990 593 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 SEPT7P4-201ENST00000437076 306 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 RPL31P60-201ENST00000478450 367 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 AC008945.1-201ENST00000505144 499 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 RN7SKP98-201ENST00000517070 156 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 AC069113.1-201ENST00000517763 267 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 SOD1P3-201ENST00000518682 454 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 MIR3614-201ENST00000581261 86 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 GLYATL1P2-202ENST00000588046 902 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 AC012119.1-201ENST00000603184 222 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 AC020765.1-201ENST00000604296 328 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 MIR6798-201ENST00000612887 67 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VARS2Q5ST30 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 AC083806.2-201ENST00000617795 2685 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 AC127070.3-201ENST00000503695 3263 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.85□□□□□ -1.31
VARS2Q5ST30 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARS2Q5ST30 AL136531.3-201ENST00000624378 3658 ntBASIC6.85□□□□□ -1.31
VARS2Q5ST30 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARS2Q5ST30 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
VARS2Q5ST30 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VARS2Q5ST30 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 NAMPTP1-201ENST00000440465 2514 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VARS2Q5ST30 RNU6-1144P-201ENST00000384247 104 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 AL513475.1-201ENST00000406602 315 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 AL357139.1-201ENST00000407792 426 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 AC094019.1-201ENST00000434678 472 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 RPL5P7-201ENST00000444235 813 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 SNORD121B-201ENST00000458838 81 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 COPS8P2-201ENST00000473228 627 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 RN7SL432P-201ENST00000484057 298 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 AP001025.1-201ENST00000486139 332 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 COX6B1P2-201ENST00000489624 230 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 RNU6-1012P-201ENST00000516606 109 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 MIR5692C2-201ENST00000577959 77 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 AC068790.4-201ENST00000602474 263 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 AC006077.1-201ENST00000604746 343 ntBASIC6.84□□□□□ -1.31
VARS2Q5ST30 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VARS2Q5ST30 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VARS2Q5ST30 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.84□□□□□ -1.31
VARS2Q5ST30 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VARS2Q5ST30 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VARS2Q5ST30 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms