Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 PABPC1P3-201ENST00000469174 459 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 HMGB1P36-201ENST00000487709 576 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 AC093767.1-201ENST00000504523 156 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 AC108475.1-201ENST00000507880 950 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 RNA5SP315-201ENST00000516340 116 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 RNA5SP312-201ENST00000517068 116 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 DUXAP2-201ENST00000519198 589 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 AC016957.1-201ENST00000534895 309 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 MIR4429-201ENST00000580105 73 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 AC022916.3-201ENST00000592961 742 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 AC245389.1-201ENST00000605141 529 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 AL591034.3-201ENST00000605511 685 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 AC069234.5-201ENST00000611056 416 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 RMST_9.1-201ENST00000619945 193 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 FAM157B-203ENST00000639350 358 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A4Q53GD3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC011266.1-201ENST00000624119 3569 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 RNU1-13P-201ENST00000384499 162 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AL022722.2-201ENST00000402519 180 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 ARL4AP5-201ENST00000404372 599 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AP000580.1-201ENST00000404439 358 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 BTBD10P2-201ENST00000404779 676 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 RAP1BP3-201ENST00000407180 549 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 TPMTP2-201ENST00000414372 726 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 UBTFL3-201ENST00000418934 1024 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 EIF4HP2-201ENST00000424380 563 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC104651.1-201ENST00000427559 735 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 NPM1P34-201ENST00000428821 893 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 MTND1P28-201ENST00000435623 950 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AL356276.2-201ENST00000435919 558 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 HSFY6P-201ENST00000445573 403 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 ST13P20-201ENST00000447996 1065 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 BX276092.4-201ENST00000452056 248 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC027673.1-201ENST00000456245 405 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 SUMO2P2-201ENST00000456482 255 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC090453.1-201ENST00000495560 436 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC093809.1-201ENST00000509155 340 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC006130.2-201ENST00000586202 326 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 IMMP1LP1-201ENST00000605170 488 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AL159169.3-201ENST00000608871 561 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC013476.2-201ENST00000614456 459 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC027807.2-201ENST00000616099 408 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 U6.42-201ENST00000618440 107 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 AC244258.1-201ENST00000637553 1071 ntBASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SLC44A4Q53GD3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SLC44A4Q53GD3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SLC44A4Q53GD3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
SLC44A4Q53GD3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.66
SLC44A4Q53GD3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
SLC44A4Q53GD3 RPL23AP57-201ENST00000332361 466 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 RNA5SP502-201ENST00000362694 119 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 RNU1-132P-201ENST00000364300 164 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 SNORA75-201ENST00000384158 137 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 MIR195-201ENST00000385194 87 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 U8.14-201ENST00000390843 143 ntBASIC4.65□□□□□ -1.67
SLC44A4Q53GD3 RPL31P1-201ENST00000398116 372 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms