Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 AC090312.2-201ENST00000582687 378 ntBASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 AC012254.4-201ENST00000588843 273 ntBASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 SEC63P2-201ENST00000503863 1939 ntBASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN20Q4JDL3 AC008432.1-201ENST00000615912 1320 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AP001350.1-201ENST00000601906 1524 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AC016716.1-201ENST00000265882 708 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 MIR22-201ENST00000362190 85 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 SNORD56.4-201ENST00000363883 71 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 RPL21P3-201ENST00000395517 478 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AL583834.1-201ENST00000406943 343 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 RNU4-27P-201ENST00000410889 139 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AL158050.1-201ENST00000416077 457 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 RPL21P66-201ENST00000426566 466 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 FTH1P1-201ENST00000437933 532 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AC104978.1-201ENST00000449387 391 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AC104308.1-201ENST00000454621 333 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 NECAP1P2-201ENST00000455668 727 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AC146507.2-201ENST00000460608 476 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 RPL5P24-201ENST00000463742 885 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AC117440.1-201ENST00000474107 571 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 HMGB1P22-201ENST00000505315 124 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AC008885.2-201ENST00000509506 930 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 MTND2P31-201ENST00000512602 616 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 OR8K2P-201ENST00000524645 927 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AL442163.2-201ENST00000553912 710 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AL021368.1-201ENST00000607490 540 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AC006023.2-201ENST00000609916 167 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 U73479.1-201ENST00000618062 168 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AC018926.3-201ENST00000618841 406 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AP003400.6-201ENST00000624698 740 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AC139713.2-210ENST00000641741 992 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AL359893.1-201ENST00000447628 1580 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AL355596.1-201ENST00000565399 3996 ntBASIC3.19□□□□□ -1.9
PTPN20Q4JDL3 AL672296.1-201ENST00000427780 2158 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 RPL23AP57-201ENST00000332361 466 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 RNA5SP27-201ENST00000363839 119 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 RN7SKP220-201ENST00000410611 288 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 RNU2-71P-201ENST00000411395 189 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 PTP4A1P3-201ENST00000433661 420 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 SSXP4-201ENST00000451349 245 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AC008280.2-201ENST00000455473 307 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 SYPL1P1-201ENST00000473622 768 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AC025768.1-201ENST00000510057 267 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AP001207.1-201ENST00000524051 481 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AP004371.1-201ENST00000525240 214 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 SERPINE4P-201ENST00000554978 281 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AL442067.2-201ENST00000614033 363 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 MIR8057-201ENST00000620957 69 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AC097460.3-201ENST00000623099 442 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 OR5BR1P-201ENST00000524992 1330 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 AC093831.2-201ENST00000624393 3427 ntBASIC3.18□□□□□ -1.9
PTPN20Q4JDL3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms