Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB40BQ12829 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40BQ12829 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.12□□□□□ -1.91
RAB40BQ12829 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40BQ12829 RPS24P6-201ENST00000452670 400 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 PNPLA4P1-201ENST00000458328 305 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 RNU7-170P-201ENST00000459303 61 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 AL133162.1-201ENST00000463228 453 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 RN7SL132P-201ENST00000478131 296 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40BQ12829 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.12□□□□□ -1.91
RAB40BQ12829 AC021146.5-201ENST00000503544 545 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40BQ12829 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.12□□□□□ -1.91
RAB40BQ12829 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40BQ12829 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40BQ12829 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.12□□□□□ -1.91
RAB40BQ12829 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.12□□□□□ -1.91
RAB40BQ12829 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.12□□□□□ -1.91
RAB40BQ12829 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.12□□□□□ -1.91
RAB40BQ12829 ZNF192P1-203ENST00000565888 810 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40BQ12829 AL158050.2-201ENST00000605336 568 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 AC068831.8-201ENST00000620171 435 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 AC018816.2-201ENST00000621460 353 ntBASIC3.12□□□□□ -1.91
RAB40BQ12829 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40BQ12829 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40BQ12829 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAB40BQ12829 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RAB40BQ12829 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.12□□□□□ -1.91
RAB40BQ12829 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40BQ12829 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.11□□□□□ -1.91
RAB40BQ12829 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.11□□□□□ -1.91
RAB40BQ12829 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40BQ12829 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40BQ12829 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40BQ12829 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40BQ12829 AC004925.1-201ENST00000624256 2706 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 MTCO1P23-201ENST00000415223 1526 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AC032011.1-201ENST00000611703 1549 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40BQ12829 U3.11-201ENST00000364476 212 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 MIR620-201ENST00000385232 95 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40BQ12829 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.11□□□□□ -1.91
RAB40BQ12829 AL356968.1-201ENST00000416622 474 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40BQ12829 AL139247.1-201ENST00000422768 325 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AL117339.2-201ENST00000430475 180 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 VN1R10P-201ENST00000447106 875 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AC008264.1-201ENST00000447612 367 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AC112492.1-201ENST00000449607 712 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AC097262.1-201ENST00000452559 548 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.11□□□□□ -1.91
RAB40BQ12829 snoU13.24-201ENST00000458998 104 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AC092757.1-201ENST00000467293 467 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 SNRPGP3-201ENST00000469405 227 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 OR4G11P-201ENST00000492842 939 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AL139099.1-201ENST00000497398 403 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 KCTD9P5-201ENST00000504141 1170 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AC108043.1-201ENST00000512696 574 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.11□□□□□ -1.91
RAB40BQ12829 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40BQ12829 AC068657.1-201ENST00000520807 306 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.11□□□□□ -1.91
RAB40BQ12829 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40BQ12829 OR4P1P-201ENST00000530808 1136 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40BQ12829 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.11□□□□□ -1.91
RAB40BQ12829 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40BQ12829 AL121603.1-201ENST00000553815 142 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.11□□□□□ -1.91
RAB40BQ12829 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40BQ12829 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.11□□□□□ -1.91
RAB40BQ12829 BNIP3P5-201ENST00000562290 498 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 MIR3912-201ENST00000577566 105 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.11□□□□□ -1.91
RAB40BQ12829 MIR4286-201ENST00000580651 93 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 XIAPP1-201ENST00000603162 600 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AL035411.2-201ENST00000604022 421 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AC097504.2-201ENST00000608088 454 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AP001521.1-201ENST00000609150 300 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AC006023.2-201ENST00000609916 167 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AC018755.4-201ENST00000619715 454 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AC084824.4-201ENST00000620106 731 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AC123767.1-202ENST00000620407 817 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 AC092184.1-201ENST00000625042 715 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.11□□□□□ -1.91
RAB40BQ12829 CYP3A51P-201ENST00000633513 256 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 MKKS-204ENST00000639674 192 ntBASIC3.11□□□□□ -1.91
RAB40BQ12829 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40BQ12829 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RAB40BQ12829 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RAB40BQ12829 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40BQ12829 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40BQ12829 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40BQ12829 AL365440.1-201ENST00000436135 2167 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms