Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
LTBQ06643 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LTBQ06643 MTND5P26-201ENST00000426018 1752 ntBASIC3.94□□□□□ -1.78
LTBQ06643 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
LTBQ06643 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBQ06643 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBQ06643 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
LTBQ06643 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LTBQ06643 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.93□□□□□ -1.78
LTBQ06643 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LTBQ06643 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.93□□□□□ -1.78
LTBQ06643 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBQ06643 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LTBQ06643 SPRR2C-201ENST00000290702 219 ntBASIC3.93□□□□□ -1.78
LTBQ06643 MIR331-201ENST00000362302 94 ntBASIC3.93□□□□□ -1.78
LTBQ06643 Y_RNA.25-201ENST00000362528 102 ntBASIC3.93□□□□□ -1.78
LTBQ06643 RNU6-216P-201ENST00000363282 104 ntBASIC3.93□□□□□ -1.78
LTBQ06643 RNU5E-4P-201ENST00000364931 120 ntBASIC3.93□□□□□ -1.78
LTBQ06643 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.93□□□□□ -1.78
LTBQ06643 RNU6-723P-201ENST00000383973 107 ntBASIC3.93□□□□□ -1.78
LTBQ06643 RNU6-297P-201ENST00000384636 107 ntBASIC3.93□□□□□ -1.78
LTBQ06643 RPS24P12-201ENST00000402084 394 ntBASIC3.93□□□□□ -1.78
LTBQ06643 LAP3P1-201ENST00000403648 294 ntBASIC3.93□□□□□ -1.78
LTBQ06643 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBQ06643 RN7SKP56-201ENST00000410513 331 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.93□□□□□ -1.78
LTBQ06643 RPL21P32-201ENST00000419877 477 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.93□□□□□ -1.78
LTBQ06643 AC009237.2-201ENST00000421358 284 ntBASIC3.93□□□□□ -1.78
LTBQ06643 MTCO3P1-205ENST00000422088 832 ntBASIC3.93□□□□□ -1.78
LTBQ06643 DPPA2P1-201ENST00000428060 556 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.93□□□□□ -1.78
LTBQ06643 HLA-N-201ENST00000437516 135 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AC004865.1-201ENST00000442276 1003 ntBASIC3.93□□□□□ -1.78
LTBQ06643 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.93□□□□□ -1.78
LTBQ06643 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.93□□□□□ -1.78
LTBQ06643 ABCF2P2-201ENST00000450549 296 ntBASIC3.93□□□□□ -1.78
LTBQ06643 SLC31A1P1-201ENST00000451221 567 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.93□□□□□ -1.78
LTBQ06643 NF1P3-201ENST00000457709 450 ntBASIC3.93□□□□□ -1.78
LTBQ06643 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.93□□□□□ -1.78
LTBQ06643 RPL7P22-201ENST00000466005 733 ntBASIC3.93□□□□□ -1.78
LTBQ06643 MTND6P6-201ENST00000478031 263 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AP000797.1-201ENST00000478870 387 ntBASIC3.93□□□□□ -1.78
LTBQ06643 TMED11P-201ENST00000479478 690 ntBASIC3.93□□□□□ -1.78
LTBQ06643 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.93□□□□□ -1.78
LTBQ06643 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.93□□□□□ -1.78
LTBQ06643 AC109464.2-201ENST00000510242 943 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AC008549.1-201ENST00000512900 643 ntBASIC3.93□□□□□ -1.78
LTBQ06643 RN7SKP298-201ENST00000515950 94 ntBASIC3.93□□□□□ -1.78
LTBQ06643 RNU6-718P-201ENST00000516166 105 ntBASIC3.93□□□□□ -1.78
LTBQ06643 RN7SKP244-201ENST00000516513 307 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.93□□□□□ -1.78
LTBQ06643 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.93□□□□□ -1.78
LTBQ06643 PHBP17-201ENST00000528576 541 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AP002748.2-201ENST00000528671 348 ntBASIC3.93□□□□□ -1.78
LTBQ06643 OR4A45P-201ENST00000529954 901 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.93□□□□□ -1.78
LTBQ06643 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.93□□□□□ -1.78
LTBQ06643 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.93□□□□□ -1.78
LTBQ06643 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.93□□□□□ -1.78
LTBQ06643 AC093519.1-201ENST00000566109 298 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AC092325.1-201ENST00000566449 554 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.93□□□□□ -1.78
LTBQ06643 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.93□□□□□ -1.78
LTBQ06643 AP001004.1-201ENST00000582468 324 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.93□□□□□ -1.78
LTBQ06643 VN1R84P-201ENST00000593697 235 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AC008739.3-201ENST00000603262 127 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AL354760.1-201ENST00000608357 643 ntBASIC3.93□□□□□ -1.78
LTBQ06643 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.93□□□□□ -1.78
LTBQ06643 AC027807.2-201ENST00000616099 408 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AC131238.1-201ENST00000617135 328 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AC007546.1-201ENST00000619452 559 ntBASIC3.93□□□□□ -1.78
LTBQ06643 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AL023881.1-201ENST00000621088 301 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AC244100.1-202ENST00000621554 382 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AC005858.4-201ENST00000623191 700 ntBASIC3.93□□□□□ -1.78
LTBQ06643 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LTBQ06643 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.93□□□□□ -1.78
LTBQ06643 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBQ06643 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBQ06643 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
LTBQ06643 AL031985.3-201ENST00000565390 2449 ntBASIC3.93□□□□□ -1.78
LTBQ06643 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LTBQ06643 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBQ06643 DBF4P1-201ENST00000412976 1892 ntBASIC3.92□□□□□ -1.78
LTBQ06643 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
LTBQ06643 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBQ06643 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.92□□□□□ -1.78
LTBQ06643 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
LTBQ06643 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBQ06643 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBQ06643 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBQ06643 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBQ06643 ASNSP1-201ENST00000518311 1939 ntBASIC3.92□□□□□ -1.78
LTBQ06643 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBQ06643 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
LTBQ06643 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBQ06643 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms