Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.79□□□□□ -1.8
GABPAQ06546 SNX5P1-201ENST00000505757 1041 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
GABPAQ06546 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.79□□□□□ -1.8
GABPAQ06546 RN7SKP234-201ENST00000517173 224 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 AP001207.1-201ENST00000524051 481 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.79□□□□□ -1.8
GABPAQ06546 AC092851.1-201ENST00000535964 478 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.79□□□□□ -1.8
GABPAQ06546 AP001180.3-201ENST00000582221 145 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 AC022069.1-201ENST00000582910 658 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.79□□□□□ -1.8
GABPAQ06546 AF131215.7-201ENST00000602443 707 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.79□□□□□ -1.8
GABPAQ06546 AC083899.3-201ENST00000603413 594 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 HSPE1P14-201ENST00000605812 302 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 AL583856.2-201ENST00000606298 543 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 AC011816.2-201ENST00000607089 556 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 AC092953.2-201ENST00000608000 699 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.79□□□□□ -1.8
GABPAQ06546 AF117829.1-206ENST00000621883 3802 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.79□□□□□ -1.8
GABPAQ06546 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GABPAQ06546 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GABPAQ06546 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.78□□□□□ -1.8
GABPAQ06546 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GABPAQ06546 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
GABPAQ06546 MTCO1P14-201ENST00000441695 1559 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 RPL23AP57-201ENST00000332361 466 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GABPAQ06546 MIR30E-201ENST00000362104 92 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.78□□□□□ -1.8
GABPAQ06546 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
GABPAQ06546 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.78□□□□□ -1.8
GABPAQ06546 RNU6-444P-201ENST00000383988 108 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.78□□□□□ -1.8
GABPAQ06546 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.78□□□□□ -1.8
GABPAQ06546 RPS6P14-201ENST00000425165 719 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 BX890604.2-201ENST00000427883 474 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.78□□□□□ -1.8
GABPAQ06546 PPIAP17-201ENST00000438507 471 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 BX276092.4-201ENST00000452056 248 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.78□□□□□ -1.8
GABPAQ06546 AC087312.1-201ENST00000471411 480 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.78□□□□□ -1.8
GABPAQ06546 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.78□□□□□ -1.8
GABPAQ06546 AC011825.1-201ENST00000484967 388 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.78□□□□□ -1.8
GABPAQ06546 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.78□□□□□ -1.8
GABPAQ06546 RNU6-276P-201ENST00000516114 96 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 RNU6-1028P-201ENST00000517164 93 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 AC023632.1-201ENST00000518463 375 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 AC010376.1-201ENST00000522101 334 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.78□□□□□ -1.8
GABPAQ06546 AL121603.1-201ENST00000553815 142 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.78□□□□□ -1.8
GABPAQ06546 TGIF1P1-201ENST00000558095 802 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 AGGF1P8-201ENST00000562979 1000 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 MTCYBP28-201ENST00000566728 1132 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 AC122134.1-202ENST00000569111 1201 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.78□□□□□ -1.8
GABPAQ06546 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.78□□□□□ -1.8
GABPAQ06546 YWHAQP7-201ENST00000603536 658 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 AC110741.2-201ENST00000605278 268 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 AL121652.1-201ENST00000608851 448 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 AL391834.2-201ENST00000609982 546 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 AC068620.4-201ENST00000636730 1182 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 AL445984.1-201ENST00000637834 659 ntBASIC3.78□□□□□ -1.8
GABPAQ06546 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.78□□□□□ -1.8
GABPAQ06546 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.78□□□□□ -1.8
GABPAQ06546 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GABPAQ06546 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GABPAQ06546 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.78□□□□□ -1.8
GABPAQ06546 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.78□□□□□ -1.8
GABPAQ06546 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
GABPAQ06546 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GABPAQ06546 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
GABPAQ06546 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
GABPAQ06546 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GABPAQ06546 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.77□□□□□ -1.81
GABPAQ06546 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GABPAQ06546 RNU6-619P-201ENST00000365146 108 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 U3.15-201ENST00000365398 212 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
GABPAQ06546 SNORA54-201ENST00000384281 123 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 RNU6-925P-201ENST00000384629 104 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 AL138878.1-201ENST00000405131 347 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.77□□□□□ -1.81
GABPAQ06546 USP9YP21-201ENST00000420603 432 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.77□□□□□ -1.81
GABPAQ06546 RPP40P1-201ENST00000426762 456 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GABPAQ06546 PTGES3P1-201ENST00000439531 483 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 MRPS31P2-201ENST00000451581 518 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.77□□□□□ -1.81
GABPAQ06546 MTATP6P9-201ENST00000515039 680 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 RNA5SP341-201ENST00000516261 117 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.77□□□□□ -1.81
GABPAQ06546 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms