Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNA5SP338-201ENST00000410495 85 ntBASIC1.55□□□□□ -2.16
RPL39P62891 HMGB3P2-201ENST00000411913 584 ntBASIC1.55□□□□□ -2.16
RPL39P62891 MTND1P23-201ENST00000416931 372 ntBASIC1.55□□□□□ -2.16
RPL39P62891 NANOGP5-201ENST00000424456 877 ntBASIC1.55□□□□□ -2.16
RPL39P62891 AC019097.1-201ENST00000424783 735 ntBASIC1.55□□□□□ -2.16
RPL39P62891 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
RPL39P62891 AC018634.1-201ENST00000437554 401 ntBASIC1.55□□□□□ -2.16
RPL39P62891 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RPL39P62891 RPS15AP7-201ENST00000439294 405 ntBASIC1.55□□□□□ -2.16
RPL39P62891 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.55□□□□□ -2.16
RPL39P62891 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.55□□□□□ -2.16
RPL39P62891 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.55□□□□□ -2.16
RPL39P62891 AL358232.1-201ENST00000448030 501 ntBASIC1.55□□□□□ -2.16
RPL39P62891 RPL7P31-201ENST00000450192 724 ntBASIC1.55□□□□□ -2.16
RPL39P62891 AL021397.1-201ENST00000451806 248 ntBASIC1.55□□□□□ -2.16
RPL39P62891 RPL37P25-201ENST00000507308 276 ntBASIC1.55□□□□□ -2.16
RPL39P62891 KLHL2P1-201ENST00000508691 521 ntBASIC1.55□□□□□ -2.16
RPL39P62891 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.55□□□□□ -2.16
RPL39P62891 IGLV3-17-201ENST00000519099 244 ntBASIC1.55□□□□□ -2.16
RPL39P62891 MTCYBP20-201ENST00000524239 1129 ntBASIC1.55□□□□□ -2.16
RPL39P62891 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.55□□□□□ -2.16
RPL39P62891 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.55□□□□□ -2.16
RPL39P62891 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.55□□□□□ -2.16
RPL39P62891 GTF3AP2-201ENST00000557014 266 ntBASIC1.55□□□□□ -2.16
RPL39P62891 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.55□□□□□ -2.16
RPL39P62891 MIR5007-201ENST00000583098 95 ntBASIC1.55□□□□□ -2.16
RPL39P62891 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.55□□□□□ -2.16
RPL39P62891 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.55□□□□□ -2.16
RPL39P62891 OR2AS2P-201ENST00000606902 342 ntBASIC1.55□□□□□ -2.16
RPL39P62891 AC107294.1-201ENST00000609524 467 ntBASIC1.55□□□□□ -2.16
RPL39P62891 AC245100.7-201ENST00000609678 442 ntBASIC1.55□□□□□ -2.16
RPL39P62891 VIS1.1-201ENST00000610517 203 ntBASIC1.55□□□□□ -2.16
RPL39P62891 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.55□□□□□ -2.16
RPL39P62891 MTND4P1-201ENST00000457501 1466 ntBASIC1.55□□□□□ -2.16
RPL39P62891 Z99496.1-201ENST00000469424 1477 ntBASIC1.55□□□□□ -2.16
RPL39P62891 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.55□□□□□ -2.16
RPL39P62891 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RPL39P62891 MTCO1P8-201ENST00000416914 1523 ntBASIC1.55□□□□□ -2.16
RPL39P62891 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.54□□□□□ -2.16
RPL39P62891 AC138393.1-206ENST00000540997 1886 ntBASIC1.54□□□□□ -2.16
RPL39P62891 OR5J1P-201ENST00000313544 939 ntBASIC1.54□□□□□ -2.16
RPL39P62891 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RPL39P62891 RNA5SP295-201ENST00000362655 121 ntBASIC1.54□□□□□ -2.16
RPL39P62891 RNA5SP160-201ENST00000364866 120 ntBASIC1.54□□□□□ -2.16
RPL39P62891 RNA5SP138-201ENST00000365098 114 ntBASIC1.54□□□□□ -2.16
RPL39P62891 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RPL39P62891 SNORA67.4-201ENST00000384688 142 ntBASIC1.54□□□□□ -2.16
RPL39P62891 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RPL39P62891 RNU6-603P-201ENST00000411403 107 ntBASIC1.54□□□□□ -2.16
RPL39P62891 COTL1P1-201ENST00000422309 375 ntBASIC1.54□□□□□ -2.16
RPL39P62891 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.54□□□□□ -2.16
RPL39P62891 AC099063.2-201ENST00000446360 662 ntBASIC1.54□□□□□ -2.16
RPL39P62891 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC1.54□□□□□ -2.16
RPL39P62891 AL445669.2-201ENST00000454425 421 ntBASIC1.54□□□□□ -2.16
RPL39P62891 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.54□□□□□ -2.16
RPL39P62891 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.54□□□□□ -2.16
RPL39P62891 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.54□□□□□ -2.16
RPL39P62891 SETP12-201ENST00000514068 805 ntBASIC1.54□□□□□ -2.16
RPL39P62891 RNA5SP24-201ENST00000516478 95 ntBASIC1.54□□□□□ -2.16
RPL39P62891 RNU1-40P-201ENST00000516816 164 ntBASIC1.54□□□□□ -2.16
RPL39P62891 RNU1-97P-201ENST00000516872 164 ntBASIC1.54□□□□□ -2.16
RPL39P62891 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.54□□□□□ -2.16
RPL39P62891 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.54□□□□□ -2.16
RPL39P62891 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.54□□□□□ -2.16
RPL39P62891 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.54□□□□□ -2.16
RPL39P62891 MIR5195-201ENST00000583555 115 ntBASIC1.54□□□□□ -2.16
RPL39P62891 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC1.54□□□□□ -2.16
RPL39P62891 AC011468.4-201ENST00000603942 409 ntBASIC1.54□□□□□ -2.16
RPL39P62891 AC006023.1-201ENST00000603944 259 ntBASIC1.54□□□□□ -2.16
RPL39P62891 AC092954.1-201ENST00000609121 445 ntBASIC1.54□□□□□ -2.16
RPL39P62891 AC096577.2-201ENST00000611455 153 ntBASIC1.54□□□□□ -2.16
RPL39P62891 AC009831.4-201ENST00000620744 325 ntBASIC1.54□□□□□ -2.16
RPL39P62891 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC1.54□□□□□ -2.16
RPL39P62891 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RPL39P62891 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.54□□□□□ -2.16
RPL39P62891 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RPL39P62891 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RPL39P62891 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RPL39P62891 AC093719.1-202ENST00000392735 373 ntBASIC1.53□□□□□ -2.16
RPL39P62891 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.53□□□□□ -2.16
RPL39P62891 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RPL39P62891 MRPL50P2-201ENST00000416821 482 ntBASIC1.53□□□□□ -2.16
RPL39P62891 RPL31P45-201ENST00000419532 356 ntBASIC1.53□□□□□ -2.16
RPL39P62891 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.53□□□□□ -2.16
RPL39P62891 AC063976.3-201ENST00000426849 329 ntBASIC1.53□□□□□ -2.16
RPL39P62891 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.53□□□□□ -2.16
RPL39P62891 MTCYBP21-201ENST00000443300 1113 ntBASIC1.53□□□□□ -2.16
RPL39P62891 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.53□□□□□ -2.16
RPL39P62891 AC025033.1-201ENST00000463883 194 ntBASIC1.53□□□□□ -2.16
RPL39P62891 AC012181.1-201ENST00000479895 423 ntBASIC1.53□□□□□ -2.16
RPL39P62891 AC135721.1-201ENST00000497954 479 ntBASIC1.53□□□□□ -2.16
RPL39P62891 AC026801.2-201ENST00000515352 425 ntBASIC1.53□□□□□ -2.16
RPL39P62891 RNU6-1334P-201ENST00000516032 105 ntBASIC1.53□□□□□ -2.16
RPL39P62891 RNA5SP148-201ENST00000516527 94 ntBASIC1.53□□□□□ -2.16
RPL39P62891 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.53□□□□□ -2.16
RPL39P62891 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC1.53□□□□□ -2.16
RPL39P62891 MIR5002-201ENST00000584713 97 ntBASIC1.53□□□□□ -2.16
RPL39P62891 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.53□□□□□ -2.16
RPL39P62891 AC010680.1-201ENST00000590024 3590 ntBASIC1.53□□□□□ -2.16
RPL39P62891 AC002984.1-201ENST00000591692 448 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms