Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RHBDL3P58872 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.8□□□□□ -1.64
RHBDL3P58872 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.8□□□□□ -1.64
RHBDL3P58872 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.8□□□□□ -1.64
RHBDL3P58872 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.8□□□□□ -1.64
RHBDL3P58872 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.8□□□□□ -1.64
RHBDL3P58872 MTATP6P24-201ENST00000576835 677 ntBASIC4.8□□□□□ -1.64
RHBDL3P58872 AC012417.1-201ENST00000582307 1039 ntBASIC4.8□□□□□ -1.64
RHBDL3P58872 AL390208.1-201ENST00000605885 644 ntBASIC4.8□□□□□ -1.64
RHBDL3P58872 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.8□□□□□ -1.64
RHBDL3P58872 AC012442.3-202ENST00000636742 206 ntBASIC4.8□□□□□ -1.64
RHBDL3P58872 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.8□□□□□ -1.64
RHBDL3P58872 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RHBDL3P58872 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RHBDL3P58872 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RHBDL3P58872 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RHBDL3P58872 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDL3P58872 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.79□□□□□ -1.64
RHBDL3P58872 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDL3P58872 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.79□□□□□ -1.64
RHBDL3P58872 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDL3P58872 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
RHBDL3P58872 LAP3P1-201ENST00000403648 294 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RHBDL3P58872 TOMM22P1-201ENST00000418578 312 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 RPL7P30-201ENST00000420888 709 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.79□□□□□ -1.64
RHBDL3P58872 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.79□□□□□ -1.64
RHBDL3P58872 ARL4AP3-201ENST00000441452 574 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.79□□□□□ -1.64
RHBDL3P58872 OR9M1P-201ENST00000459641 921 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 RPL31P50-201ENST00000471002 296 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 AC068305.1-201ENST00000497406 726 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.79□□□□□ -1.64
RHBDL3P58872 TXNP6-201ENST00000510190 310 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 COX6CP8-201ENST00000522620 226 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 OR6C7P-201ENST00000547875 934 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 AC091516.1-201ENST00000549191 703 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.79□□□□□ -1.64
RHBDL3P58872 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.79□□□□□ -1.64
RHBDL3P58872 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.79□□□□□ -1.64
RHBDL3P58872 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.79□□□□□ -1.64
RHBDL3P58872 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.79□□□□□ -1.64
RHBDL3P58872 AC004853.1-201ENST00000604902 698 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.79□□□□□ -1.64
RHBDL3P58872 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 MIR7702-201ENST00000621931 59 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 FP236240.3-201ENST00000623061 327 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 AC103706.2-201ENST00000638080 240 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 AL022578.1-201ENST00000439330 1433 ntBASIC4.79□□□□□ -1.64
RHBDL3P58872 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
RHBDL3P58872 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDL3P58872 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDL3P58872 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDL3P58872 AC011477.1-204ENST00000623416 1325 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDL3P58872 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.78□□□□□ -1.64
RHBDL3P58872 AL161781.1-201ENST00000354277 403 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 RNU6-1214P-201ENST00000363650 109 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 RNA5SP399-201ENST00000364003 117 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 HSPE1P26-201ENST00000405341 275 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 PGBD4P8-201ENST00000412993 562 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDL3P58872 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.78□□□□□ -1.64
RHBDL3P58872 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.78□□□□□ -1.64
RHBDL3P58872 HMGB1P12-201ENST00000438594 598 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 AL354941.1-201ENST00000438600 464 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RHBDL3P58872 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.78□□□□□ -1.64
RHBDL3P58872 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 AL109741.2-201ENST00000455561 343 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.78□□□□□ -1.64
RHBDL3P58872 snoU13.4-201ENST00000458916 104 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.78□□□□□ -1.64
RHBDL3P58872 RPS3AP6-201ENST00000484430 795 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 AC104685.1-201ENST00000502445 371 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.78□□□□□ -1.64
RHBDL3P58872 AC004062.1-201ENST00000509926 645 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.78□□□□□ -1.64
RHBDL3P58872 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.78□□□□□ -1.64
RHBDL3P58872 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.78□□□□□ -1.64
RHBDL3P58872 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.78□□□□□ -1.64
RHBDL3P58872 DUXAP11-201ENST00000603858 526 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 AC091167.4-201ENST00000605079 184 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.78□□□□□ -1.64
RHBDL3P58872 AL121772.2-201ENST00000614331 297 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.78□□□□□ -1.64
RHBDL3P58872 AC140725.3-201ENST00000616193 880 ntBASIC4.78□□□□□ -1.64
RHBDL3P58872 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDL3P58872 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDL3P58872 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.78□□□□□ -1.64
RHBDL3P58872 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDL3P58872 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDL3P58872 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RHBDL3P58872 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.78□□□□□ -1.64
RHBDL3P58872 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RHBDL3P58872 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDL3P58872 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.77□□□□□ -1.65
RHBDL3P58872 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms