Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC006963.1-201ENST00000624003 1052 ntBASIC3.29□□□□□ -1.88
CDH6P55285 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH6P55285 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH6P55285 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH6P55285 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDH6P55285 MTND4P34-201ENST00000572715 1371 ntBASIC3.28□□□□□ -1.88
CDH6P55285 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDH6P55285 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH6P55285 OR1S2-201ENST00000302592 978 ntBASIC3.28□□□□□ -1.88
CDH6P55285 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CDH6P55285 AL589826.1-201ENST00000340697 249 ntBASIC3.28□□□□□ -1.88
CDH6P55285 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CDH6P55285 RNU6-650P-201ENST00000365658 111 ntBASIC3.28□□□□□ -1.88
CDH6P55285 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH6P55285 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDH6P55285 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH6P55285 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CDH6P55285 Y_RNA.493-201ENST00000384422 102 ntBASIC3.28□□□□□ -1.88
CDH6P55285 MIR34B-201ENST00000385076 84 ntBASIC3.28□□□□□ -1.88
CDH6P55285 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH6P55285 AC007899.1-201ENST00000412776 775 ntBASIC3.28□□□□□ -1.88
CDH6P55285 AC005300.1-201ENST00000428401 373 ntBASIC3.28□□□□□ -1.88
CDH6P55285 HIGD1AP11-201ENST00000438361 280 ntBASIC3.28□□□□□ -1.88
CDH6P55285 RPL7P59-201ENST00000447700 943 ntBASIC3.28□□□□□ -1.88
CDH6P55285 NPM1P13-201ENST00000452663 865 ntBASIC3.28□□□□□ -1.88
CDH6P55285 snoU13.24-201ENST00000458998 104 ntBASIC3.28□□□□□ -1.88
CDH6P55285 PRDX3P4-201ENST00000470828 747 ntBASIC3.28□□□□□ -1.88
CDH6P55285 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH6P55285 RPL21P47-201ENST00000483696 477 ntBASIC3.28□□□□□ -1.88
CDH6P55285 AC092185.1-201ENST00000491371 97 ntBASIC3.28□□□□□ -1.88
CDH6P55285 AC021146.5-201ENST00000503544 545 ntBASIC3.28□□□□□ -1.88
CDH6P55285 KCTD9P5-201ENST00000504141 1170 ntBASIC3.28□□□□□ -1.88
CDH6P55285 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH6P55285 AC114967.1-201ENST00000504890 259 ntBASIC3.28□□□□□ -1.88
CDH6P55285 HSPD1P15-201ENST00000505573 1122 ntBASIC3.28□□□□□ -1.88
CDH6P55285 MTCO2P32-201ENST00000514865 403 ntBASIC3.28□□□□□ -1.88
CDH6P55285 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH6P55285 AC124293.1-201ENST00000530034 493 ntBASIC3.28□□□□□ -1.88
CDH6P55285 OR4H12P-201ENST00000556269 907 ntBASIC3.28□□□□□ -1.88
CDH6P55285 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH6P55285 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH6P55285 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH6P55285 AC005412.1-201ENST00000580812 1049 ntBASIC3.28□□□□□ -1.88
CDH6P55285 AL669831.4-202ENST00000590817 238 ntBASIC3.28□□□□□ -1.88
CDH6P55285 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDH6P55285 HSPE1P14-201ENST00000605812 302 ntBASIC3.28□□□□□ -1.88
CDH6P55285 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH6P55285 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CDH6P55285 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CDH6P55285 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
CDH6P55285 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDH6P55285 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH6P55285 U3.6-201ENST00000363622 211 ntBASIC3.27□□□□□ -1.89
CDH6P55285 RNU6-263P-201ENST00000363811 107 ntBASIC3.27□□□□□ -1.89
CDH6P55285 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH6P55285 RPL31P1-201ENST00000398116 372 ntBASIC3.27□□□□□ -1.89
CDH6P55285 RNU4-47P-201ENST00000410876 114 ntBASIC3.27□□□□□ -1.89
CDH6P55285 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH6P55285 HMGB3P23-201ENST00000414981 585 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AL009174.1-201ENST00000426577 416 ntBASIC3.27□□□□□ -1.89
CDH6P55285 DPPA2P1-201ENST00000428060 556 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AC073508.1-201ENST00000428866 656 ntBASIC3.27□□□□□ -1.89
CDH6P55285 B3GNT2P1-201ENST00000434960 952 ntBASIC3.27□□□□□ -1.89
CDH6P55285 RPS7P2-201ENST00000435134 607 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AC006028.1-201ENST00000438379 402 ntBASIC3.27□□□□□ -1.89
CDH6P55285 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH6P55285 AC108734.1-201ENST00000439549 399 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH6P55285 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH6P55285 HMGB3P6-201ENST00000444896 598 ntBASIC3.27□□□□□ -1.89
CDH6P55285 Z75741.1-201ENST00000446793 314 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AC104308.1-201ENST00000454621 333 ntBASIC3.27□□□□□ -1.89
CDH6P55285 MTND2P30-201ENST00000456663 382 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH6P55285 BTF3P5-201ENST00000457252 467 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AC109925.1-201ENST00000478069 331 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AL024509.2-201ENST00000493462 493 ntBASIC3.27□□□□□ -1.89
CDH6P55285 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH6P55285 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.27□□□□□ -1.89
CDH6P55285 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH6P55285 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH6P55285 TXNP6-201ENST00000510190 310 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AC074250.1-201ENST00000511117 192 ntBASIC3.27□□□□□ -1.89
CDH6P55285 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.27□□□□□ -1.89
CDH6P55285 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.27□□□□□ -1.89
CDH6P55285 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDH6P55285 TRAV37-201ENST00000553906 342 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH6P55285 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.27□□□□□ -1.89
CDH6P55285 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH6P55285 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH6P55285 AC103881.1-201ENST00000603476 538 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AL513477.2-201ENST00000607858 568 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AC013468.1-201ENST00000608680 598 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AP004247.3-201ENST00000608682 624 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AC069200.1-201ENST00000609511 323 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH6P55285 AC100793.4-201ENST00000613683 429 ntBASIC3.27□□□□□ -1.89
CDH6P55285 AC244100.1-202ENST00000621554 382 ntBASIC3.27□□□□□ -1.89
CDH6P55285 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms