Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SNORD67-201ENST00000390833 111 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 USP9YP21-201ENST00000420603 432 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 AC002075.2-201ENST00000425207 252 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGCS2P54868 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGCS2P54868 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGCS2P54868 HMGB1P45-201ENST00000435986 653 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGCS2P54868 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGCS2P54868 AC009263.1-201ENST00000441193 1239 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 snoU109.3-201ENST00000459477 145 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 RNU7-140P-201ENST00000459546 60 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 TRBV8-2-201ENST00000475637 270 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGCS2P54868 TRAV31-201ENST00000502780 342 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGCS2P54868 IGLVIV-53-201ENST00000520107 367 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 AC010376.1-201ENST00000522101 334 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 AP001372.4-201ENST00000524889 472 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 AC006518.2-201ENST00000542513 940 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGCS2P54868 MIR4760-201ENST00000585040 80 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.63□□□□□ -1.83
HMGCS2P54868 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
HMGCS2P54868 AL713922.2-201ENST00000619384 716 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 AC023510.2-201ENST00000622162 746 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 AL121594.5-201ENST00000631724 573 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 AC244205.2-202ENST00000635781 342 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGCS2P54868 AC104446.1-201ENST00000613728 1321 ntBASIC3.63□□□□□ -1.83
HMGCS2P54868 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCS2P54868 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCS2P54868 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCS2P54868 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCS2P54868 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCS2P54868 RNU6-353P-201ENST00000364266 108 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
HMGCS2P54868 MIR3074-201ENST00000384885 81 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.62□□□□□ -1.83
HMGCS2P54868 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 MTCO2P23-201ENST00000425216 680 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGCS2P54868 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCS2P54868 AC108734.1-201ENST00000439549 399 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 AC092170.1-201ENST00000440211 356 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGCS2P54868 AC005002.1-201ENST00000447458 540 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGCS2P54868 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.62□□□□□ -1.83
HMGCS2P54868 CDC42P1-201ENST00000456658 548 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 RPS29P26-201ENST00000477483 171 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 SNX5P1-201ENST00000505757 1041 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 AC005351.1-201ENST00000511152 786 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCS2P54868 PRELID3BP4-201ENST00000515476 571 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGCS2P54868 COX6B1P6-201ENST00000522347 255 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS2P54868 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS2P54868 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS2P54868 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS2P54868 AC023824.3-201ENST00000569003 562 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS2P54868 AC027449.1-201ENST00000608890 407 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 AL050303.3-201ENST00000613704 284 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCS2P54868 AC139713.2-210ENST00000641741 992 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 AC000403.1-201ENST00000613696 3585 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
HMGCS2P54868 NSRP1P1-201ENST00000444067 1693 ntBASIC3.62□□□□□ -1.83
HMGCS2P54868 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCS2P54868 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCS2P54868 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.61□□□□□ -1.83
HMGCS2P54868 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCS2P54868 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
HMGCS2P54868 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCS2P54868 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.61□□□□□ -1.83
HMGCS2P54868 MIR153-1-201ENST00000384914 90 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 MTATP6P31-201ENST00000406985 692 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCS2P54868 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 EEF1A1P41-201ENST00000414667 207 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCS2P54868 AC022018.1-201ENST00000430685 241 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCS2P54868 DNAJC19P8-201ENST00000452887 259 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCS2P54868 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCS2P54868 AL133477.1-201ENST00000457472 514 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.61□□□□□ -1.83
HMGCS2P54868 AC004924.1-201ENST00000480160 781 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 GTF2IP9-201ENST00000502460 301 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 UBE2V1P12-201ENST00000503954 474 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCS2P54868 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.61□□□□□ -1.83
HMGCS2P54868 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCS2P54868 AC110760.3-202ENST00000515177 371 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCS2P54868 AC021451.1-201ENST00000523498 1129 ntBASIC3.61□□□□□ -1.83
HMGCS2P54868 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms