Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
COPB1P53618 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COPB1P53618 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COPB1P53618 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COPB1P53618 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.47□□□□□ -1.69
COPB1P53618 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COPB1P53618 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.47□□□□□ -1.69
COPB1P53618 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COPB1P53618 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COPB1P53618 RNA5SP447-201ENST00000363749 119 ntBASIC4.47□□□□□ -1.69
COPB1P53618 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
COPB1P53618 RNU6-444P-201ENST00000383988 108 ntBASIC4.47□□□□□ -1.69
COPB1P53618 Y_RNA.516-201ENST00000384541 124 ntBASIC4.47□□□□□ -1.69
COPB1P53618 HSPD1P16-201ENST00000402302 394 ntBASIC4.47□□□□□ -1.69
COPB1P53618 AL031667.1-201ENST00000440222 725 ntBASIC4.47□□□□□ -1.69
COPB1P53618 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.47□□□□□ -1.69
COPB1P53618 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.47□□□□□ -1.69
COPB1P53618 FGF7P3-201ENST00000454645 303 ntBASIC4.47□□□□□ -1.69
COPB1P53618 RNA5SP246-201ENST00000458909 119 ntBASIC4.47□□□□□ -1.69
COPB1P53618 PPIAP21-201ENST00000464473 501 ntBASIC4.47□□□□□ -1.69
COPB1P53618 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COPB1P53618 AC083829.1-201ENST00000503756 657 ntBASIC4.47□□□□□ -1.69
COPB1P53618 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.47□□□□□ -1.69
COPB1P53618 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.47□□□□□ -1.69
COPB1P53618 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COPB1P53618 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.47□□□□□ -1.69
COPB1P53618 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.47□□□□□ -1.69
COPB1P53618 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.47□□□□□ -1.69
COPB1P53618 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COPB1P53618 SERPINE4P-201ENST00000554978 281 ntBASIC4.47□□□□□ -1.69
COPB1P53618 GNRHR2P1-201ENST00000555315 631 ntBASIC4.47□□□□□ -1.69
COPB1P53618 TVP23BP1-201ENST00000557500 617 ntBASIC4.47□□□□□ -1.69
COPB1P53618 HMGB3P26-201ENST00000560051 582 ntBASIC4.47□□□□□ -1.69
COPB1P53618 EIF5A2P1-201ENST00000564027 460 ntBASIC4.47□□□□□ -1.69
COPB1P53618 AC022968.1-201ENST00000567372 442 ntBASIC4.47□□□□□ -1.69
COPB1P53618 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.47□□□□□ -1.69
COPB1P53618 SNORD39.3-201ENST00000584451 71 ntBASIC4.47□□□□□ -1.69
COPB1P53618 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.47□□□□□ -1.69
COPB1P53618 AC020910.2-201ENST00000603635 610 ntBASIC4.47□□□□□ -1.69
COPB1P53618 AC005191.1-201ENST00000603950 358 ntBASIC4.47□□□□□ -1.69
COPB1P53618 NDUFA8P1-201ENST00000605525 367 ntBASIC4.47□□□□□ -1.69
COPB1P53618 MLECP1-201ENST00000615893 709 ntBASIC4.47□□□□□ -1.69
COPB1P53618 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COPB1P53618 OR4G11P-202ENST00000642116 1414 ntBASIC4.46□□□□□ -1.69
COPB1P53618 AC027514.1-201ENST00000588561 1603 ntBASIC4.46□□□□□ -1.69
COPB1P53618 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
COPB1P53618 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COPB1P53618 BDP1P-201ENST00000582658 1990 ntBASIC4.46□□□□□ -1.7
COPB1P53618 AC074029.4-201ENST00000624796 1859 ntBASIC4.46□□□□□ -1.7
COPB1P53618 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
COPB1P53618 OR4A15-201ENST00000314706 1035 ntBASIC4.46□□□□□ -1.7
COPB1P53618 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.46□□□□□ -1.7
COPB1P53618 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
COPB1P53618 RNU6-348P-201ENST00000384386 107 ntBASIC4.46□□□□□ -1.7
COPB1P53618 AL078595.1-201ENST00000404458 226 ntBASIC4.46□□□□□ -1.7
COPB1P53618 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.46□□□□□ -1.7
COPB1P53618 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
COPB1P53618 RNU2-66P-201ENST00000410650 161 ntBASIC4.46□□□□□ -1.7
COPB1P53618 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.46□□□□□ -1.7
COPB1P53618 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
COPB1P53618 SDCBPP2-201ENST00000424643 885 ntBASIC4.46□□□□□ -1.7
COPB1P53618 RSL24D1P6-201ENST00000426934 401 ntBASIC4.46□□□□□ -1.7
COPB1P53618 ZYG11AP1-201ENST00000430329 837 ntBASIC4.46□□□□□ -1.7
COPB1P53618 AC087650.1-201ENST00000431445 468 ntBASIC4.46□□□□□ -1.7
COPB1P53618 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.46□□□□□ -1.7
COPB1P53618 AL356535.1-201ENST00000440335 398 ntBASIC4.46□□□□□ -1.7
COPB1P53618 AL162388.1-201ENST00000450912 352 ntBASIC4.46□□□□□ -1.7
COPB1P53618 HMGN3P1-201ENST00000453847 193 ntBASIC4.46□□□□□ -1.7
COPB1P53618 AC069499.1-201ENST00000489433 509 ntBASIC4.46□□□□□ -1.7
COPB1P53618 RPL37P25-201ENST00000507308 276 ntBASIC4.46□□□□□ -1.7
COPB1P53618 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.46□□□□□ -1.7
COPB1P53618 AC099522.1-202ENST00000514718 367 ntBASIC4.46□□□□□ -1.7
COPB1P53618 DUXAP2-201ENST00000519198 589 ntBASIC4.46□□□□□ -1.7
COPB1P53618 BNIP3P5-201ENST00000562290 498 ntBASIC4.46□□□□□ -1.7
COPB1P53618 SULT1C2P1-202ENST00000562418 459 ntBASIC4.46□□□□□ -1.7
COPB1P53618 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.46□□□□□ -1.7
COPB1P53618 AL360157.1-201ENST00000565962 87 ntBASIC4.46□□□□□ -1.7
COPB1P53618 MIR548AB-201ENST00000584917 84 ntBASIC4.46□□□□□ -1.7
COPB1P53618 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.46□□□□□ -1.7
COPB1P53618 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.46□□□□□ -1.7
COPB1P53618 AC015871.2-201ENST00000603605 948 ntBASIC4.46□□□□□ -1.7
COPB1P53618 AL451044.1-201ENST00000604867 238 ntBASIC4.46□□□□□ -1.7
COPB1P53618 AL590392.1-201ENST00000604960 446 ntBASIC4.46□□□□□ -1.7
COPB1P53618 AC023043.4-201ENST00000612081 449 ntBASIC4.46□□□□□ -1.7
COPB1P53618 AC092794.1-201ENST00000612734 582 ntBASIC4.46□□□□□ -1.7
COPB1P53618 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.46□□□□□ -1.7
COPB1P53618 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.46□□□□□ -1.7
COPB1P53618 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
COPB1P53618 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
COPB1P53618 AL031985.3-201ENST00000565390 2449 ntBASIC4.46□□□□□ -1.7
COPB1P53618 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COPB1P53618 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
COPB1P53618 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COPB1P53618 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COPB1P53618 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
COPB1P53618 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPB1P53618 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPB1P53618 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COPB1P53618 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COPB1P53618 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms