Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.35□□□□□ -2.03
POLR2JP52435 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.35□□□□□ -2.03
POLR2JP52435 OR4U1P-201ENST00000554958 912 ntBASIC2.35□□□□□ -2.03
POLR2JP52435 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.35□□□□□ -2.03
POLR2JP52435 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
POLR2JP52435 uc_338.9-201ENST00000617424 182 ntBASIC2.35□□□□□ -2.03
POLR2JP52435 AC103988.1-201ENST00000566382 2177 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.34□□□□□ -2.03
POLR2JP52435 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.34□□□□□ -2.03
POLR2JP52435 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.34□□□□□ -2.03
POLR2JP52435 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
POLR2JP52435 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.34□□□□□ -2.03
POLR2JP52435 FAT1P1-201ENST00000406588 507 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 RPL19P1-201ENST00000411635 428 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.34□□□□□ -2.03
POLR2JP52435 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.34□□□□□ -2.03
POLR2JP52435 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.34□□□□□ -2.03
POLR2JP52435 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.34□□□□□ -2.03
POLR2JP52435 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.34□□□□□ -2.03
POLR2JP52435 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.34□□□□□ -2.03
POLR2JP52435 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.34□□□□□ -2.03
POLR2JP52435 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
POLR2JP52435 AC080014.1-201ENST00000496877 1201 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 CAB39P1-201ENST00000502277 460 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.34□□□□□ -2.03
POLR2JP52435 MTATP6P22-201ENST00000507369 598 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.34□□□□□ -2.03
POLR2JP52435 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.34□□□□□ -2.03
POLR2JP52435 AC112673.1-201ENST00000513168 575 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.34□□□□□ -2.03
POLR2JP52435 AC025881.1-201ENST00000518851 512 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 AP003467.2-201ENST00000520175 319 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
POLR2JP52435 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
POLR2JP52435 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.34□□□□□ -2.03
POLR2JP52435 CKS1BP1-201ENST00000555221 240 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.34□□□□□ -2.03
POLR2JP52435 MIR3944-201ENST00000581277 108 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 AC024220.1-201ENST00000603675 484 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 AC007619.2-201ENST00000605743 379 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 AL442067.2-201ENST00000614033 363 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 AC004696.1-201ENST00000614345 607 ntBASIC2.34□□□□□ -2.03
POLR2JP52435 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
POLR2JP52435 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
POLR2JP52435 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.34□□□□□ -2.04
POLR2JP52435 AL136164.4-201ENST00000625013 2135 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
POLR2JP52435 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
POLR2JP52435 RNU1-51P-201ENST00000365345 176 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 MIR27B-201ENST00000385129 97 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 MTCYBP7-201ENST00000419540 1134 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.33□□□□□ -2.04
POLR2JP52435 AL389915.1-201ENST00000422463 466 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 ELOCP6-201ENST00000429066 328 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.33□□□□□ -2.04
POLR2JP52435 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.33□□□□□ -2.04
POLR2JP52435 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.33□□□□□ -2.04
POLR2JP52435 AL353898.1-201ENST00000444055 238 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 AL513328.1-201ENST00000446460 224 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 AP000936.2-201ENST00000447151 681 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 RPL23AP15-201ENST00000450202 459 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.33□□□□□ -2.04
POLR2JP52435 ELOCP12-201ENST00000458706 328 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 RPL23AP45-201ENST00000476406 468 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 RPL21P103-201ENST00000479921 488 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 AC090543.1-201ENST00000492168 485 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 SNORA31.15-201ENST00000516771 132 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.33□□□□□ -2.04
POLR2JP52435 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.33□□□□□ -2.04
POLR2JP52435 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.33□□□□□ -2.04
POLR2JP52435 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.33□□□□□ -2.04
POLR2JP52435 RPL23AP84-201ENST00000571193 464 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 AC061975.8-201ENST00000587058 721 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
POLR2JP52435 AC012468.1-201ENST00000604888 430 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
POLR2JP52435 U4.3-201ENST00000621047 82 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 AC004777.1-201ENST00000624317 287 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 AC073346.2-201ENST00000624724 2058 ntBASIC2.33□□□□□ -2.04
POLR2JP52435 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
POLR2JP52435 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
POLR2JP52435 AC092435.3-201ENST00000565538 3654 ntBASIC2.32□□□□□ -2.04
POLR2JP52435 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
POLR2JP52435 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
POLR2JP52435 VTRNA1-1-201ENST00000363120 99 ntBASIC2.32□□□□□ -2.04
POLR2JP52435 RNU6-697P-201ENST00000363348 107 ntBASIC2.32□□□□□ -2.04
POLR2JP52435 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
POLR2JP52435 AL139039.1-201ENST00000401900 692 ntBASIC2.32□□□□□ -2.04
POLR2JP52435 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.32□□□□□ -2.04
POLR2JP52435 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.32□□□□□ -2.04
POLR2JP52435 TRGV6-201ENST00000417928 299 ntBASIC2.32□□□□□ -2.04
POLR2JP52435 HSPE1P1-201ENST00000421494 318 ntBASIC2.32□□□□□ -2.04
POLR2JP52435 AC073508.1-201ENST00000428866 656 ntBASIC2.32□□□□□ -2.04
POLR2JP52435 AC104389.3-201ENST00000445629 235 ntBASIC2.32□□□□□ -2.04
POLR2JP52435 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.32□□□□□ -2.04
POLR2JP52435 UBE2V2P4-201ENST00000447495 259 ntBASIC2.32□□□□□ -2.04
POLR2JP52435 SNORD109B-201ENST00000458961 67 ntBASIC2.32□□□□□ -2.04
POLR2JP52435 SNORD109A-201ENST00000459128 67 ntBASIC2.32□□□□□ -2.04
POLR2JP52435 VN1R17P-201ENST00000472048 1090 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms