Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC131238.1-201ENST00000617135 328 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AC104985.2-201ENST00000620598 500 ntBASIC5.24□□□□□ -1.57
MRE11P49959 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.24□□□□□ -1.57
MRE11P49959 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.24□□□□□ -1.57
MRE11P49959 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
MRE11P49959 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.24□□□□□ -1.57
MRE11P49959 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MRE11P49959 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MRE11P49959 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
MRE11P49959 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MRE11P49959 DHX40P1-201ENST00000588725 1412 ntBASIC5.23□□□□□ -1.57
MRE11P49959 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MRE11P49959 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MRE11P49959 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
MRE11P49959 AL031985.3-201ENST00000565390 2449 ntBASIC5.23□□□□□ -1.57
MRE11P49959 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.23□□□□□ -1.57
MRE11P49959 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
MRE11P49959 RNA5SP447-201ENST00000363749 119 ntBASIC5.23□□□□□ -1.57
MRE11P49959 Y_RNA.256-201ENST00000364594 104 ntBASIC5.23□□□□□ -1.57
MRE11P49959 RNU6-723P-201ENST00000383973 107 ntBASIC5.23□□□□□ -1.57
MRE11P49959 RNU6-146P-201ENST00000384602 108 ntBASIC5.23□□□□□ -1.57
MRE11P49959 RNU6-114P-201ENST00000384704 105 ntBASIC5.23□□□□□ -1.57
MRE11P49959 RAC1P3-201ENST00000416129 580 ntBASIC5.23□□□□□ -1.57
MRE11P49959 AC073136.2-201ENST00000417282 849 ntBASIC5.23□□□□□ -1.57
MRE11P49959 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.23□□□□□ -1.57
MRE11P49959 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.23□□□□□ -1.57
MRE11P49959 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.23□□□□□ -1.57
MRE11P49959 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.23□□□□□ -1.57
MRE11P49959 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.23□□□□□ -1.57
MRE11P49959 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.23□□□□□ -1.57
MRE11P49959 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.23□□□□□ -1.57
MRE11P49959 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.23□□□□□ -1.57
MRE11P49959 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.23□□□□□ -1.57
MRE11P49959 MTND2P24-201ENST00000453434 806 ntBASIC5.23□□□□□ -1.57
MRE11P49959 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.23□□□□□ -1.57
MRE11P49959 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.23□□□□□ -1.57
MRE11P49959 RPS3AP17-201ENST00000472594 777 ntBASIC5.23□□□□□ -1.57
MRE11P49959 AC025164.1-201ENST00000496249 478 ntBASIC5.23□□□□□ -1.57
MRE11P49959 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.23□□□□□ -1.57
MRE11P49959 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.23□□□□□ -1.57
MRE11P49959 FAM92A1P2-202ENST00000504766 877 ntBASIC5.23□□□□□ -1.57
MRE11P49959 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.23□□□□□ -1.57
MRE11P49959 AC091133.4-201ENST00000511142 308 ntBASIC5.23□□□□□ -1.57
MRE11P49959 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.23□□□□□ -1.57
MRE11P49959 AC108471.1-201ENST00000513977 287 ntBASIC5.23□□□□□ -1.57
MRE11P49959 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.23□□□□□ -1.57
MRE11P49959 OR4A45P-201ENST00000529954 901 ntBASIC5.23□□□□□ -1.57
MRE11P49959 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.23□□□□□ -1.57
MRE11P49959 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MRE11P49959 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.23□□□□□ -1.57
MRE11P49959 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.23□□□□□ -1.57
MRE11P49959 AC006960.3-201ENST00000561845 705 ntBASIC5.23□□□□□ -1.57
MRE11P49959 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.23□□□□□ -1.57
MRE11P49959 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.23□□□□□ -1.57
MRE11P49959 PSMA6P4-201ENST00000603247 718 ntBASIC5.23□□□□□ -1.57
MRE11P49959 AC069304.2-201ENST00000605154 435 ntBASIC5.23□□□□□ -1.57
MRE11P49959 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.23□□□□□ -1.57
MRE11P49959 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.23□□□□□ -1.57
MRE11P49959 ATE1-AS1-202ENST00000636460 506 ntBASIC5.23□□□□□ -1.57
MRE11P49959 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.23□□□□□ -1.57
MRE11P49959 ZNF37BP-203ENST00000452306 1352 ntBASIC5.23□□□□□ -1.57
MRE11P49959 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MRE11P49959 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
MRE11P49959 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MRE11P49959 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.22□□□□□ -1.57
MRE11P49959 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
MRE11P49959 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MRE11P49959 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
MRE11P49959 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MRE11P49959 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
MRE11P49959 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MRE11P49959 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.22□□□□□ -1.57
MRE11P49959 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
MRE11P49959 RNA5SP191-201ENST00000362585 102 ntBASIC5.22□□□□□ -1.57
MRE11P49959 RNU4-12P-201ENST00000365233 139 ntBASIC5.22□□□□□ -1.57
MRE11P49959 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MRE11P49959 MIR708-201ENST00000390708 88 ntBASIC5.22□□□□□ -1.57
MRE11P49959 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
MRE11P49959 RNA5SP306-201ENST00000411087 107 ntBASIC5.22□□□□□ -1.57
MRE11P49959 AIMP1P1-201ENST00000418670 937 ntBASIC5.22□□□□□ -1.57
MRE11P49959 AL391219.1-201ENST00000422570 483 ntBASIC5.22□□□□□ -1.57
MRE11P49959 B3GNT2P1-201ENST00000434960 952 ntBASIC5.22□□□□□ -1.57
MRE11P49959 SNRPEP8-201ENST00000442866 260 ntBASIC5.22□□□□□ -1.57
MRE11P49959 UBE2V1P7-201ENST00000446395 340 ntBASIC5.22□□□□□ -1.57
MRE11P49959 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.22□□□□□ -1.57
MRE11P49959 HMGB3P22-202ENST00000451823 572 ntBASIC5.22□□□□□ -1.57
MRE11P49959 HMGB1P36-201ENST00000487709 576 ntBASIC5.22□□□□□ -1.57
MRE11P49959 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.22□□□□□ -1.57
MRE11P49959 OR4R3P-201ENST00000525084 838 ntBASIC5.22□□□□□ -1.57
MRE11P49959 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.22□□□□□ -1.57
MRE11P49959 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.22□□□□□ -1.57
MRE11P49959 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.22□□□□□ -1.57
MRE11P49959 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.22□□□□□ -1.57
MRE11P49959 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.22□□□□□ -1.57
MRE11P49959 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.22□□□□□ -1.57
MRE11P49959 AC090751.1-201ENST00000566966 267 ntBASIC5.22□□□□□ -1.57
MRE11P49959 AC018552.3-201ENST00000567416 561 ntBASIC5.22□□□□□ -1.57
MRE11P49959 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.22□□□□□ -1.57
MRE11P49959 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.22□□□□□ -1.57
MRE11P49959 AL356055.1-201ENST00000602528 446 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms