Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL158825.1-201ENST00000414735 521 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 AC234782.4-201ENST00000417646 1048 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 RPL30P3-201ENST00000424262 333 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 MTATP6P11-201ENST00000428071 670 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 AL138799.3-201ENST00000438968 350 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.99□□□□□ -1.93
CXCL12P48061 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.99□□□□□ -1.93
CXCL12P48061 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.99□□□□□ -1.93
CXCL12P48061 HMGB3P30-201ENST00000457863 606 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 TRBV8-2-201ENST00000475637 270 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 AC126389.1-201ENST00000477436 290 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 TRBV12-1-201ENST00000479785 344 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 AC021205.2-201ENST00000480069 347 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.99□□□□□ -1.93
CXCL12P48061 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.99□□□□□ -1.93
CXCL12P48061 RNU2-58P-201ENST00000516403 183 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.99□□□□□ -1.93
CXCL12P48061 OSBPL9P3-201ENST00000534523 595 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 CYCSP39-201ENST00000565821 309 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.99□□□□□ -1.93
CXCL12P48061 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.99□□□□□ -1.93
CXCL12P48061 AC007619.2-201ENST00000605743 379 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.99□□□□□ -1.93
CXCL12P48061 AL356094.1-201ENST00000624663 1212 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 AC083865.1-201ENST00000636634 831 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 AC138649.5-201ENST00000637456 137 ntBASIC2.99□□□□□ -1.93
CXCL12P48061 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CXCL12P48061 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CXCL12P48061 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CXCL12P48061 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CXCL12P48061 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CXCL12P48061 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.98□□□□□ -1.93
CXCL12P48061 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
CXCL12P48061 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CXCL12P48061 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CXCL12P48061 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL12P48061 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CXCL12P48061 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CXCL12P48061 RNU6-543P-201ENST00000362576 108 ntBASIC2.98□□□□□ -1.93
CXCL12P48061 RNU2-37P-201ENST00000410695 177 ntBASIC2.98□□□□□ -1.93
CXCL12P48061 RNU2-6P-201ENST00000411404 190 ntBASIC2.98□□□□□ -1.93
CXCL12P48061 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.98□□□□□ -1.93
CXCL12P48061 VN1R42P-201ENST00000424651 344 ntBASIC2.98□□□□□ -1.93
CXCL12P48061 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.98□□□□□ -1.93
CXCL12P48061 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL12P48061 MTCYBP31-201ENST00000438855 1122 ntBASIC2.98□□□□□ -1.93
CXCL12P48061 AC092685.1-201ENST00000447960 1243 ntBASIC2.98□□□□□ -1.93
CXCL12P48061 AC017099.1-201ENST00000448261 1028 ntBASIC2.98□□□□□ -1.93
CXCL12P48061 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL12P48061 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.98□□□□□ -1.93
CXCL12P48061 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CXCL12P48061 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL12P48061 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.98□□□□□ -1.93
CXCL12P48061 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.98□□□□□ -1.93
CXCL12P48061 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.98□□□□□ -1.93
CXCL12P48061 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.98□□□□□ -1.93
CXCL12P48061 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.98□□□□□ -1.93
CXCL12P48061 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.98□□□□□ -1.93
CXCL12P48061 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL12P48061 AC012254.4-201ENST00000588843 273 ntBASIC2.98□□□□□ -1.93
CXCL12P48061 AC067852.4-201ENST00000590314 478 ntBASIC2.98□□□□□ -1.93
CXCL12P48061 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL12P48061 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL12P48061 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.98□□□□□ -1.93
CXCL12P48061 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL12P48061 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.98□□□□□ -1.93
CXCL12P48061 XIST_intron.1-201ENST00000619444 68 ntBASIC2.98□□□□□ -1.93
CXCL12P48061 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL12P48061 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CXCL12P48061 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CXCL12P48061 GABPAP-201ENST00000419271 1356 ntBASIC2.98□□□□□ -1.93
CXCL12P48061 AC138915.3-201ENST00000562908 1389 ntBASIC2.98□□□□□ -1.93
CXCL12P48061 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL12P48061 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CXCL12P48061 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CXCL12P48061 AC096644.4-201ENST00000563417 2912 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CXCL12P48061 AC091152.2-201ENST00000591628 2569 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CXCL12P48061 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CXCL12P48061 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.97□□□□□ -1.93
CXCL12P48061 AL031736.2-201ENST00000426573 787 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 RPL17P35-201ENST00000432217 549 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 AL512661.1-201ENST00000434586 1253 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.97□□□□□ -1.93
CXCL12P48061 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.97□□□□□ -1.93
CXCL12P48061 MTND3P24-201ENST00000506306 329 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 MTATP6P22-201ENST00000507369 598 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.97□□□□□ -1.93
CXCL12P48061 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.97□□□□□ -1.93
CXCL12P48061 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CXCL12P48061 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CXCL12P48061 AC091544.4-201ENST00000555268 342 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 ZNF192P1-203ENST00000565888 810 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 AC079148.1-201ENST00000565944 819 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 AC090751.1-201ENST00000566966 267 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.97□□□□□ -1.93
CXCL12P48061 AP001180.3-201ENST00000582221 145 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms