Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.18□□□□□ -1.9
ATRXP46100 MTND4P6-201ENST00000438297 472 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.18□□□□□ -1.9
ATRXP46100 AL353898.1-201ENST00000444055 238 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC023512.1-201ENST00000444513 499 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.18□□□□□ -1.9
ATRXP46100 AL133217.1-201ENST00000450980 425 ntBASIC3.18□□□□□ -1.9
ATRXP46100 RPL7P38-201ENST00000488396 739 ntBASIC3.18□□□□□ -1.9
ATRXP46100 CREM-238ENST00000488741 651 ntTSL 2 BASIC3.18□□□□□ -1.9
ATRXP46100 HMGB1P3-201ENST00000502802 616 ntBASIC3.18□□□□□ -1.9
ATRXP46100 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.18□□□□□ -1.9
ATRXP46100 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.18□□□□□ -1.9
ATRXP46100 MTND1P22-201ENST00000510572 951 ntBASIC3.18□□□□□ -1.9
ATRXP46100 MTCYBP37-201ENST00000510642 1133 ntBASIC3.18□□□□□ -1.9
ATRXP46100 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.18□□□□□ -1.9
ATRXP46100 IGKV3-31-201ENST00000523109 329 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.18□□□□□ -1.9
ATRXP46100 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.18□□□□□ -1.9
ATRXP46100 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.18□□□□□ -1.9
ATRXP46100 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.18□□□□□ -1.9
ATRXP46100 AP001004.1-201ENST00000582468 324 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC067852.3-201ENST00000589177 561 ntBASIC3.18□□□□□ -1.9
ATRXP46100 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.18□□□□□ -1.9
ATRXP46100 Z99497.2-201ENST00000603634 310 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC016877.3-201ENST00000606778 504 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC013562.2-201ENST00000611632 603 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AL359535.1-201ENST00000612100 1087 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC024595.1-201ENST00000623088 387 ntBASIC3.18□□□□□ -1.9
ATRXP46100 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.18□□□□□ -1.9
ATRXP46100 AC068620.4-201ENST00000636730 1182 ntBASIC3.18□□□□□ -1.9
ATRXP46100 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
ATRXP46100 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ATRXP46100 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATRXP46100 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.18□□□□□ -1.9
ATRXP46100 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATRXP46100 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
ATRXP46100 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ATRXP46100 VTA1P1-201ENST00000414044 866 ntBASIC3.18□□□□□ -1.9
ATRXP46100 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.18□□□□□ -1.9
ATRXP46100 AC016907.1-201ENST00000419483 435 ntBASIC3.18□□□□□ -1.9
ATRXP46100 PAICSP7-201ENST00000419829 962 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC011233.1-201ENST00000422812 283 ntBASIC3.18□□□□□ -1.9
ATRXP46100 DLGAP5P1-201ENST00000430307 464 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.18□□□□□ -1.9
ATRXP46100 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.18□□□□□ -1.9
ATRXP46100 AC092170.1-201ENST00000440211 356 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AP000936.2-201ENST00000447151 681 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AL591623.2-201ENST00000449978 222 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.18□□□□□ -1.9
ATRXP46100 AL109741.2-201ENST00000455561 343 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC005229.2-201ENST00000456995 399 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC021205.1-201ENST00000468797 348 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC004263.1-201ENST00000479327 332 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.18□□□□□ -1.9
ATRXP46100 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ATRXP46100 AC090819.1-201ENST00000523800 1111 ntBASIC3.18□□□□□ -1.9
ATRXP46100 ELOCP32-201ENST00000548625 324 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC010198.2-201ENST00000550612 259 ntBASIC3.18□□□□□ -1.9
ATRXP46100 SLC25A36P1-201ENST00000590111 465 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC121247.2-201ENST00000604776 136 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC099785.1-201ENST00000605697 437 ntBASIC3.18□□□□□ -1.9
ATRXP46100 AC017037.3-201ENST00000625016 472 ntBASIC3.18□□□□□ -1.9
ATRXP46100 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.18□□□□□ -1.9
ATRXP46100 AL121594.5-201ENST00000631724 573 ntBASIC3.18□□□□□ -1.9
ATRXP46100 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.18□□□□□ -1.9
ATRXP46100 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATRXP46100 MAPK10-373ENST00000641983 6772 ntBASIC3.18□□□□□ -1.9
ATRXP46100 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
ATRXP46100 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATRXP46100 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.18□□□□□ -1.9
ATRXP46100 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATRXP46100 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ATRXP46100 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ATRXP46100 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATRXP46100 RNU4-24P-201ENST00000364565 139 ntBASIC3.17□□□□□ -1.9
ATRXP46100 SNORD65C-201ENST00000390962 71 ntBASIC3.17□□□□□ -1.9
ATRXP46100 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.17□□□□□ -1.9
ATRXP46100 AL049610.1-201ENST00000423374 372 ntBASIC3.17□□□□□ -1.9
ATRXP46100 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.17□□□□□ -1.9
ATRXP46100 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.17□□□□□ -1.9
ATRXP46100 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.17□□□□□ -1.9
ATRXP46100 HSPE1P22-201ENST00000456856 327 ntBASIC3.17□□□□□ -1.9
ATRXP46100 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.17□□□□□ -1.9
ATRXP46100 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.17□□□□□ -1.9
ATRXP46100 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.17□□□□□ -1.9
ATRXP46100 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.17□□□□□ -1.9
ATRXP46100 AC005476.1-201ENST00000554427 397 ntBASIC3.17□□□□□ -1.9
ATRXP46100 AC008015.1-201ENST00000555505 465 ntBASIC3.17□□□□□ -1.9
ATRXP46100 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.17□□□□□ -1.9
ATRXP46100 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.17□□□□□ -1.9
ATRXP46100 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.17□□□□□ -1.9
ATRXP46100 MIR5708-201ENST00000579723 85 ntBASIC3.17□□□□□ -1.9
ATRXP46100 AC025165.5-201ENST00000602802 578 ntBASIC3.17□□□□□ -1.9
ATRXP46100 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ATRXP46100 AC010975.3-201ENST00000618727 978 ntBASIC3.17□□□□□ -1.9
ATRXP46100 AC069209.1-201ENST00000619282 651 ntBASIC3.17□□□□□ -1.9
ATRXP46100 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ATRXP46100 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATRXP46100 AC125336.1-201ENST00000508893 2827 ntBASIC3.17□□□□□ -1.9
ATRXP46100 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms