Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL136984.1-201ENST00000607611 1893 ntBASIC6.17□□□□□ -1.42
VARSP26640 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.17□□□□□ -1.42
VARSP26640 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.17□□□□□ -1.42
VARSP26640 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
VARSP26640 AC027287.1-201ENST00000553115 1453 ntBASIC6.17□□□□□ -1.42
VARSP26640 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
VARSP26640 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VARSP26640 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VARSP26640 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.17□□□□□ -1.42
VARSP26640 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VARSP26640 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VARSP26640 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VARSP26640 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VARSP26640 RN7SKP95-201ENST00000362860 303 ntBASIC6.17□□□□□ -1.42
VARSP26640 RNU4-50P-201ENST00000364361 141 ntBASIC6.17□□□□□ -1.42
VARSP26640 RNU6-715P-201ENST00000365204 103 ntBASIC6.17□□□□□ -1.42
VARSP26640 SNORD82-201ENST00000365530 70 ntBASIC6.17□□□□□ -1.42
VARSP26640 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.17□□□□□ -1.42
VARSP26640 Y_RNA.506-201ENST00000384494 102 ntBASIC6.17□□□□□ -1.42
VARSP26640 MIR517A-201ENST00000385001 87 ntBASIC6.17□□□□□ -1.42
VARSP26640 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VARSP26640 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VARSP26640 AC069218.2-201ENST00000411665 344 ntBASIC6.17□□□□□ -1.42
VARSP26640 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.17□□□□□ -1.42
VARSP26640 BX276092.3-201ENST00000424182 230 ntBASIC6.17□□□□□ -1.42
VARSP26640 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.17□□□□□ -1.42
VARSP26640 AL133396.1-201ENST00000432048 687 ntBASIC6.17□□□□□ -1.42
VARSP26640 TMSB4XP3-201ENST00000445144 114 ntBASIC6.17□□□□□ -1.42
VARSP26640 NDUFB1P2-201ENST00000449477 176 ntBASIC6.17□□□□□ -1.42
VARSP26640 RNU7-187P-201ENST00000458985 68 ntBASIC6.17□□□□□ -1.42
VARSP26640 snoU13.29-201ENST00000459370 104 ntBASIC6.17□□□□□ -1.42
VARSP26640 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
VARSP26640 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VARSP26640 AC092436.3-201ENST00000511788 257 ntBASIC6.17□□□□□ -1.42
VARSP26640 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.17□□□□□ -1.42
VARSP26640 IGKV1D-22-201ENST00000518953 324 ntBASIC6.17□□□□□ -1.42
VARSP26640 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.17□□□□□ -1.42
VARSP26640 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.17□□□□□ -1.42
VARSP26640 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VARSP26640 SULT1C2P2-201ENST00000562517 294 ntBASIC6.17□□□□□ -1.42
VARSP26640 OR4H6P-201ENST00000563771 921 ntBASIC6.17□□□□□ -1.42
VARSP26640 SMIM12P1-201ENST00000603004 274 ntBASIC6.17□□□□□ -1.42
VARSP26640 AC064801.1-201ENST00000612025 407 ntBASIC6.17□□□□□ -1.42
VARSP26640 AC022467.1-201ENST00000614738 749 ntBASIC6.17□□□□□ -1.42
VARSP26640 AL359547.2-201ENST00000615810 418 ntBASIC6.17□□□□□ -1.42
VARSP26640 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.17□□□□□ -1.42
VARSP26640 AL159153.1-201ENST00000619688 317 ntBASIC6.17□□□□□ -1.42
VARSP26640 LINC02019-201ENST00000608605 2060 ntBASIC6.17□□□□□ -1.42
VARSP26640 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
VARSP26640 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
VARSP26640 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VARSP26640 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
VARSP26640 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VARSP26640 AC109446.4-201ENST00000623235 2755 ntBASIC6.17□□□□□ -1.42
VARSP26640 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VARSP26640 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VARSP26640 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VARSP26640 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
VARSP26640 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
VARSP26640 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.16□□□□□ -1.42
VARSP26640 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VARSP26640 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.16□□□□□ -1.42
VARSP26640 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
VARSP26640 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.16□□□□□ -1.42
VARSP26640 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
VARSP26640 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
VARSP26640 Y_RNA.151-201ENST00000363566 112 ntBASIC6.16□□□□□ -1.42
VARSP26640 RNU1-59P-201ENST00000364829 162 ntBASIC6.16□□□□□ -1.42
VARSP26640 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
VARSP26640 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VARSP26640 RNU6-48P-201ENST00000384161 107 ntBASIC6.16□□□□□ -1.42
VARSP26640 AL138885.1-201ENST00000405921 675 ntBASIC6.16□□□□□ -1.42
VARSP26640 RNA5SP111-201ENST00000411386 101 ntBASIC6.16□□□□□ -1.42
VARSP26640 HMGA1P8-201ENST00000414130 321 ntBASIC6.16□□□□□ -1.42
VARSP26640 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.16□□□□□ -1.42
VARSP26640 CYP4F30P-202ENST00000420048 405 ntBASIC6.16□□□□□ -1.42
VARSP26640 C4BPAP2-201ENST00000428434 478 ntBASIC6.16□□□□□ -1.42
VARSP26640 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.16□□□□□ -1.42
VARSP26640 AL645568.3-201ENST00000433683 316 ntBASIC6.16□□□□□ -1.42
VARSP26640 AC098831.1-201ENST00000440661 216 ntBASIC6.16□□□□□ -1.42
VARSP26640 AL353691.1-201ENST00000451332 387 ntBASIC6.16□□□□□ -1.42
VARSP26640 AC013470.1-201ENST00000453438 462 ntBASIC6.16□□□□□ -1.42
VARSP26640 RNU7-169P-201ENST00000459456 61 ntBASIC6.16□□□□□ -1.42
VARSP26640 RN7SL552P-201ENST00000462094 276 ntBASIC6.16□□□□□ -1.42
VARSP26640 AC005912.1-201ENST00000495392 255 ntBASIC6.16□□□□□ -1.42
VARSP26640 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.16□□□□□ -1.42
VARSP26640 RNA5SP418-201ENST00000515951 117 ntBASIC6.16□□□□□ -1.42
VARSP26640 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.16□□□□□ -1.42
VARSP26640 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.16□□□□□ -1.42
VARSP26640 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC6.16□□□□□ -1.42
VARSP26640 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.16□□□□□ -1.42
VARSP26640 AC023968.1-201ENST00000560719 475 ntBASIC6.16□□□□□ -1.42
VARSP26640 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.16□□□□□ -1.42
VARSP26640 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.16□□□□□ -1.42
VARSP26640 AC010620.2-201ENST00000600135 313 ntBASIC6.16□□□□□ -1.42
VARSP26640 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.16□□□□□ -1.42
VARSP26640 AC015982.1-201ENST00000608113 465 ntBASIC6.16□□□□□ -1.42
VARSP26640 U1.25-201ENST00000614085 162 ntBASIC6.16□□□□□ -1.42
VARSP26640 MIR6721-201ENST00000617181 87 ntBASIC6.16□□□□□ -1.42
VARSP26640 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms