Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 RNA5SP306-201ENST00000411087 107 ntBASIC3.98□□□□□ -1.77
CHMP24386 AC011933.1-201ENST00000413334 321 ntBASIC3.98□□□□□ -1.77
CHMP24386 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CHMP24386 RPL36AP36-201ENST00000418616 301 ntBASIC3.98□□□□□ -1.77
CHMP24386 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.98□□□□□ -1.77
CHMP24386 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.98□□□□□ -1.77
CHMP24386 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.98□□□□□ -1.77
CHMP24386 AL359073.1-201ENST00000448036 403 ntBASIC3.98□□□□□ -1.77
CHMP24386 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.98□□□□□ -1.77
CHMP24386 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CHMP24386 AC116533.1-201ENST00000459748 321 ntBASIC3.98□□□□□ -1.77
CHMP24386 RPL21P104-201ENST00000464143 478 ntBASIC3.98□□□□□ -1.77
CHMP24386 LINC00888-204ENST00000487386 421 ntBASIC3.98□□□□□ -1.77
CHMP24386 AC093278.1-201ENST00000494700 600 ntBASIC3.98□□□□□ -1.77
CHMP24386 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.98□□□□□ -1.77
CHMP24386 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.98□□□□□ -1.77
CHMP24386 RNU6-714P-201ENST00000516963 103 ntBASIC3.98□□□□□ -1.77
CHMP24386 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.98□□□□□ -1.77
CHMP24386 AP000926.4-201ENST00000527351 454 ntBASIC3.98□□□□□ -1.77
CHMP24386 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.98□□□□□ -1.77
CHMP24386 SNRPGP16-201ENST00000533275 226 ntBASIC3.98□□□□□ -1.77
CHMP24386 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.98□□□□□ -1.77
CHMP24386 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CHMP24386 RPL23AP87-202ENST00000573039 466 ntBASIC3.98□□□□□ -1.77
CHMP24386 FAM60BP-201ENST00000578364 658 ntBASIC3.98□□□□□ -1.77
CHMP24386 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.98□□□□□ -1.77
CHMP24386 OR4K8P-201ENST00000578842 1048 ntBASIC3.98□□□□□ -1.77
CHMP24386 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.98□□□□□ -1.77
CHMP24386 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.98□□□□□ -1.77
CHMP24386 AL353778.1-201ENST00000603149 408 ntBASIC3.98□□□□□ -1.77
CHMP24386 AP001330.4-201ENST00000604350 154 ntBASIC3.98□□□□□ -1.77
CHMP24386 AC024560.3-201ENST00000608482 349 ntBASIC3.98□□□□□ -1.77
CHMP24386 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.98□□□□□ -1.77
CHMP24386 MLECP1-201ENST00000615893 709 ntBASIC3.98□□□□□ -1.77
CHMP24386 AC018816.2-201ENST00000621460 353 ntBASIC3.98□□□□□ -1.77
CHMP24386 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CHMP24386 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.98□□□□□ -1.77
CHMP24386 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CHMP24386 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CHMP24386 AL133383.2-201ENST00000622958 2336 ntBASIC3.98□□□□□ -1.77
CHMP24386 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CHMP24386 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP24386 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.97□□□□□ -1.77
CHMP24386 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP24386 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CHMP24386 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.97□□□□□ -1.77
CHMP24386 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CHMP24386 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CHMP24386 AL391994.1-201ENST00000254724 282 ntBASIC3.97□□□□□ -1.77
CHMP24386 AC126755.2-208ENST00000327792 462 ntBASIC3.97□□□□□ -1.77
CHMP24386 AC138969.1-213ENST00000331436 462 ntBASIC3.97□□□□□ -1.77
CHMP24386 RNU6-97P-201ENST00000363387 104 ntBASIC3.97□□□□□ -1.77
CHMP24386 RNU6-744P-201ENST00000365557 107 ntBASIC3.97□□□□□ -1.77
CHMP24386 RNA5SP88-201ENST00000365560 109 ntBASIC3.97□□□□□ -1.77
CHMP24386 RNU6-1316P-201ENST00000384242 108 ntBASIC3.97□□□□□ -1.77
CHMP24386 AL356421.1-201ENST00000403255 413 ntBASIC3.97□□□□□ -1.77
CHMP24386 RNA5SP129-201ENST00000410276 118 ntBASIC3.97□□□□□ -1.77
CHMP24386 JKAMPP1-201ENST00000413804 919 ntBASIC3.97□□□□□ -1.77
CHMP24386 SNRPFP1-201ENST00000414761 252 ntBASIC3.97□□□□□ -1.77
CHMP24386 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP24386 SSXP9-201ENST00000417503 292 ntBASIC3.97□□□□□ -1.77
CHMP24386 PTP4A1P5-201ENST00000420305 455 ntBASIC3.97□□□□□ -1.77
CHMP24386 AC011233.1-201ENST00000422812 283 ntBASIC3.97□□□□□ -1.77
CHMP24386 RBMY1KP-201ENST00000423480 476 ntBASIC3.97□□□□□ -1.77
CHMP24386 DUTP6-201ENST00000425573 462 ntBASIC3.97□□□□□ -1.77
CHMP24386 AC091390.1-201ENST00000433904 331 ntBASIC3.97□□□□□ -1.77
CHMP24386 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.97□□□□□ -1.77
CHMP24386 OR6K5P-201ENST00000447050 945 ntBASIC3.97□□□□□ -1.77
CHMP24386 VN1R40P-201ENST00000455196 941 ntBASIC3.97□□□□□ -1.77
CHMP24386 AC109327.1-201ENST00000471666 403 ntBASIC3.97□□□□□ -1.77
CHMP24386 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.97□□□□□ -1.77
CHMP24386 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP24386 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.97□□□□□ -1.77
CHMP24386 AC017037.2-201ENST00000513850 890 ntBASIC3.97□□□□□ -1.77
CHMP24386 MTND5P4-201ENST00000514978 288 ntBASIC3.97□□□□□ -1.77
CHMP24386 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP24386 OR5AP1P-201ENST00000529730 940 ntBASIC3.97□□□□□ -1.77
CHMP24386 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.97□□□□□ -1.77
CHMP24386 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.97□□□□□ -1.77
CHMP24386 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.97□□□□□ -1.77
CHMP24386 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.97□□□□□ -1.77
CHMP24386 ISCA1P3-201ENST00000577104 373 ntBASIC3.97□□□□□ -1.77
CHMP24386 AL139344.1-201ENST00000605228 195 ntBASIC3.97□□□□□ -1.77
CHMP24386 AC012603.1-201ENST00000606424 528 ntBASIC3.97□□□□□ -1.77
CHMP24386 AC092354.2-201ENST00000607786 514 ntBASIC3.97□□□□□ -1.77
CHMP24386 AC092653.1-201ENST00000608509 531 ntBASIC3.97□□□□□ -1.77
CHMP24386 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.97□□□□□ -1.77
CHMP24386 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.97□□□□□ -1.77
CHMP24386 MIR6758-201ENST00000620653 63 ntBASIC3.97□□□□□ -1.77
CHMP24386 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.97□□□□□ -1.77
CHMP24386 AC140479.6-201ENST00000633535 357 ntBASIC3.97□□□□□ -1.77
CHMP24386 MIR6830-201ENST00000636015 70 ntBASIC3.97□□□□□ -1.77
CHMP24386 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP24386 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP24386 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP24386 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP24386 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CHMP24386 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.97□□□□□ -1.77
CHMP24386 ZNF962P-201ENST00000443465 3140 ntBASIC3.97□□□□□ -1.77
CHMP24386 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms