Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFX1P22670 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFX1P22670 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFX1P22670 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.18□□□□□ -1.42
RFX1P22670 TTC41P-205ENST00000551270 3963 ntBASIC6.18□□□□□ -1.42
RFX1P22670 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.18□□□□□ -1.42
RFX1P22670 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.18□□□□□ -1.42
RFX1P22670 AC011155.1-201ENST00000316512 456 ntBASIC6.18□□□□□ -1.42
RFX1P22670 Y_RNA.132-201ENST00000363421 102 ntBASIC6.18□□□□□ -1.42
RFX1P22670 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RFX1P22670 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RFX1P22670 SOD2P1-201ENST00000396543 562 ntBASIC6.18□□□□□ -1.42
RFX1P22670 RPS4XP9-201ENST00000405151 780 ntBASIC6.18□□□□□ -1.42
RFX1P22670 RN7SKP159-201ENST00000410657 292 ntBASIC6.18□□□□□ -1.42
RFX1P22670 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.18□□□□□ -1.42
RFX1P22670 AL133482.1-201ENST00000415988 498 ntBASIC6.18□□□□□ -1.42
RFX1P22670 AC114491.1-201ENST00000416095 246 ntBASIC6.18□□□□□ -1.42
RFX1P22670 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.18□□□□□ -1.42
RFX1P22670 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.18□□□□□ -1.42
RFX1P22670 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.18□□□□□ -1.42
RFX1P22670 AC099670.2-201ENST00000435130 321 ntBASIC6.18□□□□□ -1.42
RFX1P22670 BRK1P2-201ENST00000442875 223 ntBASIC6.18□□□□□ -1.42
RFX1P22670 AC007967.1-201ENST00000455422 1159 ntBASIC6.18□□□□□ -1.42
RFX1P22670 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC6.18□□□□□ -1.42
RFX1P22670 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.18□□□□□ -1.42
RFX1P22670 MTND4P17-201ENST00000470444 350 ntBASIC6.18□□□□□ -1.42
RFX1P22670 RPS17P5-201ENST00000498293 408 ntBASIC6.18□□□□□ -1.42
RFX1P22670 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.18□□□□□ -1.42
RFX1P22670 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.18□□□□□ -1.42
RFX1P22670 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.18□□□□□ -1.42
RFX1P22670 RNU6-1170P-201ENST00000515974 106 ntBASIC6.18□□□□□ -1.42
RFX1P22670 MYL12AP1-201ENST00000518490 515 ntBASIC6.18□□□□□ -1.42
RFX1P22670 IGBP1P1-201ENST00000554337 1009 ntBASIC6.18□□□□□ -1.42
RFX1P22670 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.18□□□□□ -1.42
RFX1P22670 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.18□□□□□ -1.42
RFX1P22670 AL390240.1-201ENST00000612950 384 ntBASIC6.18□□□□□ -1.42
RFX1P22670 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFX1P22670 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFX1P22670 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFX1P22670 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.18□□□□□ -1.42
RFX1P22670 AC083899.1-201ENST00000454465 3819 ntBASIC6.18□□□□□ -1.42
RFX1P22670 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.18□□□□□ -1.42
RFX1P22670 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
RFX1P22670 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RFX1P22670 AC090229.1-201ENST00000590983 1609 ntBASIC6.17□□□□□ -1.42
RFX1P22670 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RFX1P22670 DDX10P1-201ENST00000448545 1933 ntBASIC6.17□□□□□ -1.42
RFX1P22670 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.17□□□□□ -1.42
RFX1P22670 API5P2-201ENST00000397055 1498 ntBASIC6.17□□□□□ -1.42
RFX1P22670 AC004656.1-201ENST00000568479 4951 ntBASIC6.17□□□□□ -1.42
RFX1P22670 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
RFX1P22670 AP001350.1-201ENST00000601906 1524 ntBASIC6.17□□□□□ -1.42
RFX1P22670 RNA5SP453-201ENST00000362503 119 ntBASIC6.17□□□□□ -1.42
RFX1P22670 Y_RNA.128-201ENST00000363391 112 ntBASIC6.17□□□□□ -1.42
RFX1P22670 Y_RNA.167-201ENST00000363735 109 ntBASIC6.17□□□□□ -1.42
RFX1P22670 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RFX1P22670 Y_RNA.579-201ENST00000390939 94 ntBASIC6.17□□□□□ -1.42
RFX1P22670 HMGB1P20-201ENST00000402555 677 ntBASIC6.17□□□□□ -1.42
RFX1P22670 RNU4-46P-201ENST00000410818 138 ntBASIC6.17□□□□□ -1.42
RFX1P22670 RPL21P24-201ENST00000413752 448 ntBASIC6.17□□□□□ -1.42
RFX1P22670 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.17□□□□□ -1.42
RFX1P22670 CALM2P2-201ENST00000428512 440 ntBASIC6.17□□□□□ -1.42
RFX1P22670 AC016712.1-201ENST00000431088 378 ntBASIC6.17□□□□□ -1.42
RFX1P22670 TRAPPC2P9-201ENST00000434556 343 ntBASIC6.17□□□□□ -1.42
RFX1P22670 GTF2IP13-201ENST00000438487 386 ntBASIC6.17□□□□□ -1.42
RFX1P22670 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.17□□□□□ -1.42
RFX1P22670 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.17□□□□□ -1.42
RFX1P22670 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.17□□□□□ -1.42
RFX1P22670 AC234775.1-201ENST00000454247 670 ntBASIC6.17□□□□□ -1.42
RFX1P22670 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.17□□□□□ -1.42
RFX1P22670 RNU7-66P-201ENST00000459469 62 ntBASIC6.17□□□□□ -1.42
RFX1P22670 RN7SL432P-201ENST00000484057 298 ntBASIC6.17□□□□□ -1.42
RFX1P22670 RN7SL30P-201ENST00000488416 306 ntBASIC6.17□□□□□ -1.42
RFX1P22670 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.17□□□□□ -1.42
RFX1P22670 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.17□□□□□ -1.42
RFX1P22670 AC098591.2-201ENST00000510152 315 ntBASIC6.17□□□□□ -1.42
RFX1P22670 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC6.17□□□□□ -1.42
RFX1P22670 BTF3P13-201ENST00000513224 490 ntBASIC6.17□□□□□ -1.42
RFX1P22670 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.17□□□□□ -1.42
RFX1P22670 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.17□□□□□ -1.42
RFX1P22670 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.17□□□□□ -1.42
RFX1P22670 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RFX1P22670 AC137627.1-201ENST00000545761 289 ntBASIC6.17□□□□□ -1.42
RFX1P22670 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.17□□□□□ -1.42
RFX1P22670 AL118558.2-201ENST00000556294 238 ntBASIC6.17□□□□□ -1.42
RFX1P22670 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.17□□□□□ -1.42
RFX1P22670 AC096996.1-201ENST00000563813 325 ntBASIC6.17□□□□□ -1.42
RFX1P22670 FRG2DP-202ENST00000566967 323 ntBASIC6.17□□□□□ -1.42
RFX1P22670 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.17□□□□□ -1.42
RFX1P22670 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
RFX1P22670 POLR3GP2-201ENST00000588366 668 ntBASIC6.17□□□□□ -1.42
RFX1P22670 TUG1_2.1-201ENST00000614234 87 ntBASIC6.17□□□□□ -1.42
RFX1P22670 AC090607.5-201ENST00000615692 224 ntBASIC6.17□□□□□ -1.42
RFX1P22670 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.17□□□□□ -1.42
RFX1P22670 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RFX1P22670 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RFX1P22670 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RFX1P22670 BCORP1-203ENST00000513194 5093 ntBASIC6.17□□□□□ -1.42
RFX1P22670 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFX1P22670 AC012618.3-205ENST00000637896 1496 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms