Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.4□□□□□ -1.87
XRCC1P18887 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
XRCC1P18887 AC117529.2-201ENST00000512159 2068 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
XRCC1P18887 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
XRCC1P18887 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
XRCC1P18887 RNU6-839P-201ENST00000363347 108 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 RNU1-33P-201ENST00000364249 162 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 RNU6-921P-201ENST00000384361 107 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 RNU6-1000P-201ENST00000391066 106 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 SKINT1L-201ENST00000401057 817 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 AL603865.2-201ENST00000401679 213 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 HSPE1P26-201ENST00000405341 275 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 RPS7P9-201ENST00000414704 586 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 AIMP1P1-201ENST00000418670 937 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 OFD1P18Y-201ENST00000420889 959 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.39□□□□□ -1.87
XRCC1P18887 AC114973.1-201ENST00000429057 632 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.39□□□□□ -1.87
XRCC1P18887 PTGES3P1-201ENST00000439531 483 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
XRCC1P18887 HMGN2P21-201ENST00000447764 270 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.39□□□□□ -1.87
XRCC1P18887 AC007967.1-201ENST00000455422 1159 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.39□□□□□ -1.87
XRCC1P18887 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.39□□□□□ -1.87
XRCC1P18887 SETP14-201ENST00000497538 873 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 AL358832.1-201ENST00000497800 389 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.39□□□□□ -1.87
XRCC1P18887 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.39□□□□□ -1.87
XRCC1P18887 AC109471.1-201ENST00000511631 612 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 AC023141.12-201ENST00000512399 199 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 AC023632.1-201ENST00000518463 375 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.39□□□□□ -1.87
XRCC1P18887 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
XRCC1P18887 LSM6P2-201ENST00000552208 177 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 NCAPGP2-201ENST00000557911 754 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.39□□□□□ -1.87
XRCC1P18887 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.39□□□□□ -1.87
XRCC1P18887 AC093519.1-201ENST00000566109 298 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.39□□□□□ -1.87
XRCC1P18887 AC090616.5-202ENST00000582111 297 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.39□□□□□ -1.87
XRCC1P18887 AC007179.3-201ENST00000604976 235 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 AP000238.1-201ENST00000608759 426 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 AC093673.2-201ENST00000609674 331 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 AP003485.1-201ENST00000625093 753 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 AC005183.1-201ENST00000603687 1979 ntBASIC3.39□□□□□ -1.87
XRCC1P18887 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
XRCC1P18887 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
XRCC1P18887 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
XRCC1P18887 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
XRCC1P18887 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
XRCC1P18887 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.38□□□□□ -1.87
XRCC1P18887 AL356274.2-201ENST00000624379 3752 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
XRCC1P18887 SNORD116-23-201ENST00000384645 92 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 MCTS2P-201ENST00000394552 546 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
XRCC1P18887 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
XRCC1P18887 RNA5SP293-201ENST00000410527 113 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 RNA5SP107-201ENST00000411358 122 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 USP9YP21-201ENST00000420603 432 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.38□□□□□ -1.87
XRCC1P18887 AC005019.1-201ENST00000436455 431 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 SETP5-201ENST00000437270 562 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.38□□□□□ -1.87
XRCC1P18887 AL357552.1-201ENST00000445254 415 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.38□□□□□ -1.87
XRCC1P18887 RPL26P28-201ENST00000451325 435 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 NDUFA5P7-201ENST00000452914 242 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.38□□□□□ -1.87
XRCC1P18887 PLGLA-201ENST00000465668 449 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.38□□□□□ -1.87
XRCC1P18887 RPL32P34-201ENST00000486380 400 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.38□□□□□ -1.87
XRCC1P18887 AC069306.1-201ENST00000507006 843 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 RNU6-1028P-201ENST00000517164 93 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 RN7SKP289-201ENST00000517244 295 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 IGKV2-26-201ENST00000518305 343 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.38□□□□□ -1.87
XRCC1P18887 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
XRCC1P18887 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.38□□□□□ -1.87
XRCC1P18887 AC087897.1-201ENST00000550134 156 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 AC044913.1-201ENST00000557200 430 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.38□□□□□ -1.87
XRCC1P18887 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.38□□□□□ -1.87
XRCC1P18887 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.38□□□□□ -1.87
XRCC1P18887 TMF1P1-201ENST00000576058 373 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.38□□□□□ -1.87
XRCC1P18887 AP003973.1-201ENST00000604639 691 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 AL109620.1-201ENST00000618738 1197 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
XRCC1P18887 ZNF826P-207ENST00000622273 1910 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 ZNF734P-201ENST00000419494 1534 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 AL359893.1-201ENST00000447628 1580 ntBASIC3.38□□□□□ -1.87
XRCC1P18887 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.38□□□□□ -1.87
XRCC1P18887 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms