Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.84□□□□□ -1.47
LIG1P18858 AL645937.3-201ENST00000453647 936 ntBASIC5.84□□□□□ -1.47
LIG1P18858 RPS15AP36-201ENST00000492022 382 ntBASIC5.84□□□□□ -1.47
LIG1P18858 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIG1P18858 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.84□□□□□ -1.47
LIG1P18858 HMGB1P19-201ENST00000517578 577 ntBASIC5.84□□□□□ -1.47
LIG1P18858 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.84□□□□□ -1.47
LIG1P18858 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.84□□□□□ -1.47
LIG1P18858 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.84□□□□□ -1.47
LIG1P18858 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.84□□□□□ -1.47
LIG1P18858 AC079075.1-201ENST00000559543 878 ntBASIC5.84□□□□□ -1.47
LIG1P18858 MIR3691-201ENST00000578066 90 ntBASIC5.84□□□□□ -1.47
LIG1P18858 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.84□□□□□ -1.47
LIG1P18858 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.84□□□□□ -1.47
LIG1P18858 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.84□□□□□ -1.47
LIG1P18858 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.84□□□□□ -1.47
LIG1P18858 AC008121.3-201ENST00000618726 433 ntBASIC5.84□□□□□ -1.47
LIG1P18858 AC009248.2-201ENST00000619826 254 ntBASIC5.84□□□□□ -1.47
LIG1P18858 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.84□□□□□ -1.47
LIG1P18858 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIG1P18858 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIG1P18858 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.84□□□□□ -1.47
LIG1P18858 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.84□□□□□ -1.48
LIG1P18858 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.84□□□□□ -1.48
LIG1P18858 AL049555.1-201ENST00000562834 1933 ntBASIC5.84□□□□□ -1.48
LIG1P18858 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.83□□□□□ -1.48
LIG1P18858 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIG1P18858 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.83□□□□□ -1.48
LIG1P18858 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIG1P18858 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
LIG1P18858 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIG1P18858 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIG1P18858 RNU6-1097P-201ENST00000363586 107 ntBASIC5.83□□□□□ -1.48
LIG1P18858 RNU6-108P-201ENST00000365558 107 ntBASIC5.83□□□□□ -1.48
LIG1P18858 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.83□□□□□ -1.48
LIG1P18858 Y_RNA.474-201ENST00000384341 102 ntBASIC5.83□□□□□ -1.48
LIG1P18858 MIR606-201ENST00000384851 96 ntBASIC5.83□□□□□ -1.48
LIG1P18858 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIG1P18858 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LIG1P18858 RN7SKP126-201ENST00000411143 300 ntBASIC5.83□□□□□ -1.48
LIG1P18858 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.83□□□□□ -1.48
LIG1P18858 VN1R36P-201ENST00000414936 291 ntBASIC5.83□□□□□ -1.48
LIG1P18858 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.83□□□□□ -1.48
LIG1P18858 RPL23AP15-201ENST00000450202 459 ntBASIC5.83□□□□□ -1.48
LIG1P18858 RPL7P22-201ENST00000466005 733 ntBASIC5.83□□□□□ -1.48
LIG1P18858 AC009127.1-201ENST00000467090 155 ntBASIC5.83□□□□□ -1.48
LIG1P18858 AC005532.2-201ENST00000467154 373 ntBASIC5.83□□□□□ -1.48
LIG1P18858 AC104563.1-201ENST00000476147 376 ntBASIC5.83□□□□□ -1.48
LIG1P18858 RPS3AP50-201ENST00000487064 803 ntBASIC5.83□□□□□ -1.48
LIG1P18858 AC034222.1-201ENST00000494052 532 ntBASIC5.83□□□□□ -1.48
LIG1P18858 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.83□□□□□ -1.48
LIG1P18858 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.83□□□□□ -1.48
LIG1P18858 GAPDHP56-201ENST00000506031 988 ntBASIC5.83□□□□□ -1.48
LIG1P18858 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.83□□□□□ -1.48
LIG1P18858 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.83□□□□□ -1.48
LIG1P18858 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LIG1P18858 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.83□□□□□ -1.48
LIG1P18858 AP005597.4-201ENST00000526762 229 ntBASIC5.83□□□□□ -1.48
LIG1P18858 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.83□□□□□ -1.48
LIG1P18858 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.83□□□□□ -1.48
LIG1P18858 AL352979.3-201ENST00000553515 247 ntBASIC5.83□□□□□ -1.48
LIG1P18858 HMGB1P6-201ENST00000569046 646 ntBASIC5.83□□□□□ -1.48
LIG1P18858 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.83□□□□□ -1.48
LIG1P18858 MIR3118-1-201ENST00000581787 76 ntBASIC5.83□□□□□ -1.48
LIG1P18858 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.83□□□□□ -1.48
LIG1P18858 OR7E18P-201ENST00000592589 702 ntBASIC5.83□□□□□ -1.48
LIG1P18858 OR10AB1P-201ENST00000609613 938 ntBASIC5.83□□□□□ -1.48
LIG1P18858 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.83□□□□□ -1.48
LIG1P18858 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.83□□□□□ -1.48
LIG1P18858 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIG1P18858 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIG1P18858 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIG1P18858 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIG1P18858 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
LIG1P18858 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIG1P18858 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.82□□□□□ -1.48
LIG1P18858 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LIG1P18858 RPL7P26-201ENST00000333817 754 ntBASIC5.82□□□□□ -1.48
LIG1P18858 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIG1P18858 SNORA20.2-201ENST00000383922 131 ntBASIC5.82□□□□□ -1.48
LIG1P18858 AL078604.1-201ENST00000404609 466 ntBASIC5.82□□□□□ -1.48
LIG1P18858 TXNP7-201ENST00000406296 293 ntBASIC5.82□□□□□ -1.48
LIG1P18858 AL356967.1-201ENST00000406305 431 ntBASIC5.82□□□□□ -1.48
LIG1P18858 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.82□□□□□ -1.48
LIG1P18858 RNU4-34P-201ENST00000410431 124 ntBASIC5.82□□□□□ -1.48
LIG1P18858 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.82□□□□□ -1.48
LIG1P18858 AC078974.1-201ENST00000411597 223 ntBASIC5.82□□□□□ -1.48
LIG1P18858 MTND3P8-201ENST00000412909 339 ntBASIC5.82□□□□□ -1.48
LIG1P18858 RPS7P15-201ENST00000415804 584 ntBASIC5.82□□□□□ -1.48
LIG1P18858 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.82□□□□□ -1.48
LIG1P18858 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.82□□□□□ -1.48
LIG1P18858 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.82□□□□□ -1.48
LIG1P18858 AC024082.2-201ENST00000434771 238 ntBASIC5.82□□□□□ -1.48
LIG1P18858 AC236972.2-201ENST00000434979 310 ntBASIC5.82□□□□□ -1.48
LIG1P18858 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.82□□□□□ -1.48
LIG1P18858 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LIG1P18858 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.82□□□□□ -1.48
LIG1P18858 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.82□□□□□ -1.48
LIG1P18858 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.82□□□□□ -1.48
LIG1P18858 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms