Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.53□□□□□ -2
COL6A3P12111 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.53□□□□□ -2
COL6A3P12111 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.53□□□□□ -2
COL6A3P12111 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
COL6A3P12111 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
COL6A3P12111 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.53□□□□□ -2
COL6A3P12111 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.53□□□□□ -2
COL6A3P12111 MIR6504-201ENST00000613520 61 ntBASIC2.53□□□□□ -2
COL6A3P12111 EXOC5P1-201ENST00000510543 1969 ntBASIC2.53□□□□□ -2
COL6A3P12111 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.53□□□□□ -2.01
COL6A3P12111 AL450263.2-201ENST00000439400 589 ntBASIC2.53□□□□□ -2.01
COL6A3P12111 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.53□□□□□ -2.01
COL6A3P12111 AC011978.2-201ENST00000569835 2054 ntBASIC2.52□□□□□ -2.01
COL6A3P12111 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.52□□□□□ -2.01
COL6A3P12111 AC093536.2-201ENST00000565257 1406 ntBASIC2.52□□□□□ -2.01
COL6A3P12111 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.52□□□□□ -2.01
COL6A3P12111 AL163540.1-201ENST00000485382 386 ntBASIC2.52□□□□□ -2.01
COL6A3P12111 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL6A3P12111 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.52□□□□□ -2.01
COL6A3P12111 AL356489.2-201ENST00000566968 3528 ntBASIC2.52□□□□□ -2.01
COL6A3P12111 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
COL6A3P12111 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.52□□□□□ -2.01
COL6A3P12111 SNORA67.3-201ENST00000384366 140 ntBASIC2.52□□□□□ -2.01
COL6A3P12111 AL023807.1-201ENST00000407932 359 ntBASIC2.52□□□□□ -2.01
COL6A3P12111 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.52□□□□□ -2.01
COL6A3P12111 HMGB3P11-201ENST00000440127 604 ntBASIC2.52□□□□□ -2.01
COL6A3P12111 Z73417.1-201ENST00000447373 778 ntBASIC2.52□□□□□ -2.01
COL6A3P12111 AC008507.1-201ENST00000587506 734 ntBASIC2.52□□□□□ -2.01
COL6A3P12111 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL6A3P12111 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
COL6A3P12111 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
COL6A3P12111 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
COL6A3P12111 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
COL6A3P12111 AC108078.3-201ENST00000502633 489 ntBASIC2.51□□□□□ -2.01
COL6A3P12111 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.51□□□□□ -2.01
COL6A3P12111 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.51□□□□□ -2.01
COL6A3P12111 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.51□□□□□ -2.01
COL6A3P12111 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.51□□□□□ -2.01
COL6A3P12111 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.51□□□□□ -2.01
COL6A3P12111 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL6A3P12111 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
COL6A3P12111 GCNT6-201ENST00000379591 934 ntBASIC2.51□□□□□ -2.01
COL6A3P12111 RNU1-89P-201ENST00000384592 164 ntBASIC2.51□□□□□ -2.01
COL6A3P12111 FAR1P1-201ENST00000427163 934 ntBASIC2.51□□□□□ -2.01
COL6A3P12111 AL445646.1-201ENST00000431784 216 ntBASIC2.51□□□□□ -2.01
COL6A3P12111 AC003982.1-202ENST00000469928 248 ntBASIC2.51□□□□□ -2.01
COL6A3P12111 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.51□□□□□ -2.01
COL6A3P12111 AC026436.1-201ENST00000510537 270 ntBASIC2.51□□□□□ -2.01
COL6A3P12111 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.51□□□□□ -2.01
COL6A3P12111 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.51□□□□□ -2.01
COL6A3P12111 ELL2P4-201ENST00000446870 1376 ntBASIC2.51□□□□□ -2.01
COL6A3P12111 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
COL6A3P12111 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COL6A3P12111 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
COL6A3P12111 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL6A3P12111 RNU6-342P-201ENST00000384521 104 ntBASIC2.51□□□□□ -2.01
COL6A3P12111 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.51□□□□□ -2.01
COL6A3P12111 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.51□□□□□ -2.01
COL6A3P12111 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.51□□□□□ -2.01
COL6A3P12111 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL6A3P12111 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL6A3P12111 Y_RNA.205-201ENST00000364128 113 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 RNU6-1-201ENST00000383898 107 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 RNU6-42P-201ENST00000384165 107 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 RNU6-36P-201ENST00000384172 107 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 RNU6-4P-201ENST00000384205 107 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 RNU6-5P-201ENST00000384238 107 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 RNU6-3P-201ENST00000384314 107 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 RNU6-2-201ENST00000384627 107 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 RNU6-9-201ENST00000384776 107 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 RNU6-33P-201ENST00000384793 107 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL6A3P12111 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL6A3P12111 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.5□□□□□ -2.01
COL6A3P12111 RPS12P5-201ENST00000423449 371 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.5□□□□□ -2.01
COL6A3P12111 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.5□□□□□ -2.01
COL6A3P12111 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.5□□□□□ -2.01
COL6A3P12111 AL731537.2-201ENST00000561565 951 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 RNU6-6P-201ENST00000606623 107 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL6A3P12111 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.5□□□□□ -2.01
COL6A3P12111 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL6A3P12111 RNU6-392P-201ENST00000364926 101 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 RPS12P23-201ENST00000419579 400 ntBASIC2.5□□□□□ -2.01
COL6A3P12111 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
COL6A3P12111 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL6A3P12111 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
COL6A3P12111 MTND4P10-201ENST00000446199 1363 ntBASIC2.49□□□□□ -2.01
COL6A3P12111 AC093908.1-201ENST00000623125 8092 ntBASIC2.49□□□□□ -2.01
COL6A3P12111 AP000275.1-201ENST00000411943 390 ntBASIC2.49□□□□□ -2.01
COL6A3P12111 AC127526.1-201ENST00000417526 366 ntBASIC2.49□□□□□ -2.01
COL6A3P12111 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC2.49□□□□□ -2.01
COL6A3P12111 SNRPGP18-201ENST00000553000 214 ntBASIC2.49□□□□□ -2.01
COL6A3P12111 MIR4635-201ENST00000583759 79 ntBASIC2.49□□□□□ -2.01
COL6A3P12111 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.49□□□□□ -2.01
COL6A3P12111 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL6A3P12111 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.49□□□□□ -2.01
COL6A3P12111 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
COL6A3P12111 AC092991.1-201ENST00000477176 376 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms