Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.96□□□□□ -1.62
COL6A2P12110 CYCSP34-201ENST00000458172 304 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AC063943.1-201ENST00000465434 453 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 RN7SL799P-201ENST00000475891 298 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.96□□□□□ -1.62
COL6A2P12110 RN7SL184P-201ENST00000488308 297 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 NDUFA5P12-201ENST00000503796 343 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AK3P4-201ENST00000504283 583 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.96□□□□□ -1.62
COL6A2P12110 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.96□□□□□ -1.62
COL6A2P12110 FGF7P4-201ENST00000509595 295 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AC010486.1-201ENST00000511793 424 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.96□□□□□ -1.62
COL6A2P12110 RNA5SP360-201ENST00000516555 118 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.96□□□□□ -1.62
COL6A2P12110 HAUS8P1-201ENST00000549005 542 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.96□□□□□ -1.62
COL6A2P12110 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.96□□□□□ -1.62
COL6A2P12110 CYCSP40-201ENST00000575927 294 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 MIR4489-201ENST00000578869 62 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.96□□□□□ -1.62
COL6A2P12110 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.96□□□□□ -1.62
COL6A2P12110 AC008782.1-201ENST00000603386 430 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AC010680.3-201ENST00000604215 520 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AC104687.2-201ENST00000604442 342 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.96□□□□□ -1.62
COL6A2P12110 DISC2.1-201ENST00000612827 205 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AC022467.1-201ENST00000614738 749 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AC131238.1-201ENST00000617135 328 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.96□□□□□ -1.62
COL6A2P12110 MIR6837-201ENST00000620884 64 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AC009902.3-201ENST00000606235 2172 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.96□□□□□ -1.62
COL6A2P12110 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
COL6A2P12110 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
COL6A2P12110 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
COL6A2P12110 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.96□□□□□ -1.62
COL6A2P12110 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL6A2P12110 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL6A2P12110 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL6A2P12110 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.95□□□□□ -1.62
COL6A2P12110 AC011460.1-201ENST00000636268 1834 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL6A2P12110 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
COL6A2P12110 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL6A2P12110 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.95□□□□□ -1.62
COL6A2P12110 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL6A2P12110 AC011155.1-201ENST00000316512 456 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 Y_RNA.142-201ENST00000363491 102 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 SNORA69-201ENST00000383895 132 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AP000580.1-201ENST00000404439 358 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 RN7SKP114-201ENST00000410327 279 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 RN7SKP235-201ENST00000410662 305 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 RNU6-373P-201ENST00000411247 98 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 OR9R1P-201ENST00000412200 877 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.95□□□□□ -1.62
COL6A2P12110 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.95□□□□□ -1.62
COL6A2P12110 BX323845.1-201ENST00000432417 179 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AC114495.1-201ENST00000441274 436 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AC016691.1-201ENST00000441321 413 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.95□□□□□ -1.62
COL6A2P12110 AC021382.1-201ENST00000483523 359 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.95□□□□□ -1.62
COL6A2P12110 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.95□□□□□ -1.62
COL6A2P12110 Y_RNA.719-201ENST00000517156 106 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.95□□□□□ -1.62
COL6A2P12110 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.95□□□□□ -1.62
COL6A2P12110 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.95□□□□□ -1.62
COL6A2P12110 AC012339.2-201ENST00000523996 453 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AC022832.1-201ENST00000530718 645 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.95□□□□□ -1.62
COL6A2P12110 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL6A2P12110 AL049779.2-201ENST00000553847 315 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.95□□□□□ -1.62
COL6A2P12110 OR4T1P-201ENST00000554933 911 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.95□□□□□ -1.62
COL6A2P12110 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.95□□□□□ -1.62
COL6A2P12110 AC018552.3-201ENST00000567416 561 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AC015917.1-201ENST00000579654 510 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AC018638.8-201ENST00000588755 281 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.95□□□□□ -1.62
COL6A2P12110 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.95□□□□□ -1.62
COL6A2P12110 AC068790.3-201ENST00000602988 553 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 RNF138P2-201ENST00000603490 592 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 OR6R2P-201ENST00000609216 300 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AC024940.5-201ENST00000622889 474 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AP002505.2-201ENST00000623585 696 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AC079597.1-201ENST00000624306 508 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AL596275.2-204ENST00000641628 552 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 AL596275.2-206ENST00000641957 626 ntBASIC4.95□□□□□ -1.62
COL6A2P12110 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL6A2P12110 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL6A2P12110 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL6A2P12110 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL6A2P12110 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL6A2P12110 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL6A2P12110 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.94□□□□□ -1.62
COL6A2P12110 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms