Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AP002360.4-201ENST00000606980 481 ntBASIC4.33□□□□□ -1.72
PF4V1P10720 AC126118.1-201ENST00000607744 628 ntBASIC4.33□□□□□ -1.72
PF4V1P10720 AC010133.1-201ENST00000615809 842 ntBASIC4.33□□□□□ -1.72
PF4V1P10720 AL713922.2-201ENST00000619384 716 ntBASIC4.33□□□□□ -1.72
PF4V1P10720 AC018445.2-201ENST00000622987 260 ntBASIC4.33□□□□□ -1.72
PF4V1P10720 AC110801.1-201ENST00000623590 212 ntBASIC4.33□□□□□ -1.72
PF4V1P10720 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.33□□□□□ -1.72
PF4V1P10720 AC000095.2-202ENST00000637415 154 ntBASIC4.33□□□□□ -1.72
PF4V1P10720 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.33□□□□□ -1.72
PF4V1P10720 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PF4V1P10720 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PF4V1P10720 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PF4V1P10720 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.33□□□□□ -1.72
PF4V1P10720 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PF4V1P10720 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PF4V1P10720 EXOC5P1-201ENST00000510543 1969 ntBASIC4.33□□□□□ -1.72
PF4V1P10720 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.33□□□□□ -1.72
PF4V1P10720 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.32□□□□□ -1.72
PF4V1P10720 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PF4V1P10720 AC108467.2-201ENST00000617640 1597 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 OR4K15-201ENST00000305051 1216 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 AC073343.1-201ENST00000328239 651 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 RNA5SP234-201ENST00000363916 119 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 RNU5E-6P-201ENST00000365574 115 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PF4V1P10720 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PF4V1P10720 HSPA8P15-201ENST00000401676 786 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 RNU2-36P-201ENST00000410361 191 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.32□□□□□ -1.72
PF4V1P10720 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.32□□□□□ -1.72
PF4V1P10720 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.32□□□□□ -1.72
PF4V1P10720 MTCO2P19-201ENST00000427513 598 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 MTATP6P13-201ENST00000438531 667 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.32□□□□□ -1.72
PF4V1P10720 RPS11P7-201ENST00000442125 465 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 AC019185.1-201ENST00000442718 389 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.32□□□□□ -1.72
PF4V1P10720 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PF4V1P10720 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.32□□□□□ -1.72
PF4V1P10720 SNRPGP6-201ENST00000451124 220 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 VN1R17P-201ENST00000472048 1090 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 RPS4XP1-201ENST00000482189 787 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 RPS3AP14-201ENST00000483907 780 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.32□□□□□ -1.72
PF4V1P10720 RNU6-390P-201ENST00000516259 103 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 SCARNA16.4-201ENST00000516956 187 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 AC136777.2-201ENST00000522979 358 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PF4V1P10720 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.32□□□□□ -1.72
PF4V1P10720 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.32□□□□□ -1.72
PF4V1P10720 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.32□□□□□ -1.72
PF4V1P10720 AP005403.1-201ENST00000579720 229 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.32□□□□□ -1.72
PF4V1P10720 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.32□□□□□ -1.72
PF4V1P10720 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.32□□□□□ -1.72
PF4V1P10720 AF250324.2-201ENST00000608299 610 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.32□□□□□ -1.72
PF4V1P10720 AC004696.1-201ENST00000614345 607 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 AL118522.2-201ENST00000616045 615 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 AC016769.4-201ENST00000616893 535 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.32□□□□□ -1.72
PF4V1P10720 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PF4V1P10720 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PF4V1P10720 AC079776.5-201ENST00000641920 211 ntBASIC4.32□□□□□ -1.72
PF4V1P10720 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PF4V1P10720 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PF4V1P10720 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.32□□□□□ -1.72
PF4V1P10720 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PF4V1P10720 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.32□□□□□ -1.72
PF4V1P10720 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.32□□□□□ -1.72
PF4V1P10720 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PF4V1P10720 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.32□□□□□ -1.72
PF4V1P10720 MAPK10-328ENST00000641553 4009 ntBASIC4.31□□□□□ -1.72
PF4V1P10720 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PF4V1P10720 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.31□□□□□ -1.72
PF4V1P10720 AP000542.2-201ENST00000623199 6179 ntBASIC4.31□□□□□ -1.72
PF4V1P10720 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.31□□□□□ -1.72
PF4V1P10720 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PF4V1P10720 GABPAP-201ENST00000419271 1356 ntBASIC4.31□□□□□ -1.72
PF4V1P10720 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PF4V1P10720 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PF4V1P10720 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PF4V1P10720 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PF4V1P10720 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PF4V1P10720 U3.10-201ENST00000364459 214 ntBASIC4.31□□□□□ -1.72
PF4V1P10720 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PF4V1P10720 RNU6-39P-201ENST00000384344 107 ntBASIC4.31□□□□□ -1.72
PF4V1P10720 RNA5SP187-201ENST00000384400 119 ntBASIC4.31□□□□□ -1.72
PF4V1P10720 SNORD56.6-201ENST00000384569 71 ntBASIC4.31□□□□□ -1.72
PF4V1P10720 PPIAP9-201ENST00000403866 498 ntBASIC4.31□□□□□ -1.72
PF4V1P10720 MIR1290-201ENST00000408735 78 ntBASIC4.31□□□□□ -1.72
PF4V1P10720 MTATP6P18-201ENST00000417994 673 ntBASIC4.31□□□□□ -1.72
PF4V1P10720 RGS17P1-201ENST00000423358 553 ntBASIC4.31□□□□□ -1.72
PF4V1P10720 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.31□□□□□ -1.72
PF4V1P10720 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.31□□□□□ -1.72
PF4V1P10720 AL139148.1-201ENST00000427122 680 ntBASIC4.31□□□□□ -1.72
PF4V1P10720 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.31□□□□□ -1.72
PF4V1P10720 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.31□□□□□ -1.72
PF4V1P10720 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.31□□□□□ -1.72
PF4V1P10720 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms