Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 FRG1DP-201ENST00000635586 771 ntBASIC3.32□□□□□ -1.88
RETP07949 AC127502.3-201ENST00000636170 1206 ntBASIC3.32□□□□□ -1.88
RETP07949 OR5BR1P-201ENST00000524992 1330 ntBASIC3.32□□□□□ -1.88
RETP07949 AL355578.1-201ENST00000607405 1328 ntBASIC3.32□□□□□ -1.88
RETP07949 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.32□□□□□ -1.88
RETP07949 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.32□□□□□ -1.88
RETP07949 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.32□□□□□ -1.88
RETP07949 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RETP07949 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RETP07949 AC103988.1-201ENST00000566382 2177 ntBASIC3.32□□□□□ -1.88
RETP07949 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RETP07949 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.32□□□□□ -1.88
RETP07949 AL021368.2-201ENST00000606125 5352 ntBASIC3.32□□□□□ -1.88
RETP07949 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RETP07949 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RETP07949 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.31□□□□□ -1.88
RETP07949 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RETP07949 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.31□□□□□ -1.88
RETP07949 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RETP07949 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RETP07949 RNU6-805P-201ENST00000365643 106 ntBASIC3.31□□□□□ -1.88
RETP07949 RNU2-17P-201ENST00000410290 190 ntBASIC3.31□□□□□ -1.88
RETP07949 HMGB3P23-201ENST00000414981 585 ntBASIC3.31□□□□□ -1.88
RETP07949 AC063979.1-201ENST00000415539 377 ntBASIC3.31□□□□□ -1.88
RETP07949 AL513174.1-201ENST00000423182 629 ntBASIC3.31□□□□□ -1.88
RETP07949 OOSP1P1-201ENST00000423265 274 ntBASIC3.31□□□□□ -1.88
RETP07949 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.31□□□□□ -1.88
RETP07949 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.31□□□□□ -1.88
RETP07949 OR2B8P-201ENST00000432841 938 ntBASIC3.31□□□□□ -1.88
RETP07949 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.31□□□□□ -1.88
RETP07949 RPS27P5-201ENST00000444247 244 ntBASIC3.31□□□□□ -1.88
RETP07949 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.31□□□□□ -1.88
RETP07949 NF1P3-201ENST00000457709 450 ntBASIC3.31□□□□□ -1.88
RETP07949 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
RETP07949 RPL37P6-202ENST00000464216 403 ntBASIC3.31□□□□□ -1.88
RETP07949 RN7SL442P-201ENST00000473804 320 ntBASIC3.31□□□□□ -1.88
RETP07949 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RETP07949 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.31□□□□□ -1.88
RETP07949 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.31□□□□□ -1.88
RETP07949 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.31□□□□□ -1.88
RETP07949 AC110792.2-201ENST00000510278 224 ntBASIC3.31□□□□□ -1.88
RETP07949 MIR2276-201ENST00000516886 89 ntBASIC3.31□□□□□ -1.88
RETP07949 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.31□□□□□ -1.88
RETP07949 PSMA2P1-201ENST00000526365 646 ntBASIC3.31□□□□□ -1.88
RETP07949 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.31□□□□□ -1.88
RETP07949 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.31□□□□□ -1.88
RETP07949 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.31□□□□□ -1.88
RETP07949 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.31□□□□□ -1.88
RETP07949 AC233266.2-201ENST00000567067 528 ntBASIC3.31□□□□□ -1.88
RETP07949 MIR3162-201ENST00000581818 82 ntBASIC3.31□□□□□ -1.88
RETP07949 AC008507.1-201ENST00000587506 734 ntBASIC3.31□□□□□ -1.88
RETP07949 AL133393.1-201ENST00000603277 287 ntBASIC3.31□□□□□ -1.88
RETP07949 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RETP07949 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RETP07949 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RETP07949 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RETP07949 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RETP07949 AC093010.3-201ENST00000570269 15214 ntBASIC3.3□□□□□ -1.88
RETP07949 AL049737.1-201ENST00000413920 1403 ntBASIC3.3□□□□□ -1.88
RETP07949 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RETP07949 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RETP07949 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.3□□□□□ -1.88
RETP07949 RNU6-796P-201ENST00000391086 107 ntBASIC3.3□□□□□ -1.88
RETP07949 RNU2-72P-201ENST00000411175 163 ntBASIC3.3□□□□□ -1.88
RETP07949 RNU2-71P-201ENST00000411395 189 ntBASIC3.3□□□□□ -1.88
RETP07949 VTA1P1-201ENST00000414044 866 ntBASIC3.3□□□□□ -1.88
RETP07949 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.3□□□□□ -1.88
RETP07949 RPL23AP82-202ENST00000427528 469 ntBASIC3.3□□□□□ -1.88
RETP07949 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.3□□□□□ -1.88
RETP07949 AC023347.2-201ENST00000433994 462 ntBASIC3.3□□□□□ -1.88
RETP07949 AL590762.3-201ENST00000436372 640 ntBASIC3.3□□□□□ -1.88
RETP07949 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.3□□□□□ -1.88
RETP07949 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.3□□□□□ -1.88
RETP07949 RPL23AP23-201ENST00000452590 471 ntBASIC3.3□□□□□ -1.88
RETP07949 AC096992.1-201ENST00000459808 709 ntBASIC3.3□□□□□ -1.88
RETP07949 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.3□□□□□ -1.88
RETP07949 CENPBD1P1-201ENST00000464061 469 ntBASIC3.3□□□□□ -1.88
RETP07949 RPL23AP67-201ENST00000465341 474 ntBASIC3.3□□□□□ -1.88
RETP07949 RPL31P50-201ENST00000471002 296 ntBASIC3.3□□□□□ -1.88
RETP07949 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.3□□□□□ -1.88
RETP07949 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.3□□□□□ -1.88
RETP07949 AC103783.1-201ENST00000520506 373 ntBASIC3.3□□□□□ -1.88
RETP07949 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.3□□□□□ -1.88
RETP07949 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.3□□□□□ -1.88
RETP07949 OR8L1P-201ENST00000534005 955 ntBASIC3.3□□□□□ -1.88
RETP07949 HIGD1AP1-201ENST00000550979 275 ntBASIC3.3□□□□□ -1.88
RETP07949 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.3□□□□□ -1.88
RETP07949 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.3□□□□□ -1.88
RETP07949 AC092474.3-201ENST00000603022 568 ntBASIC3.3□□□□□ -1.88
RETP07949 AC091488.1-201ENST00000604239 660 ntBASIC3.3□□□□□ -1.88
RETP07949 RPL21P136-201ENST00000605378 396 ntBASIC3.3□□□□□ -1.88
RETP07949 AC004832.5-201ENST00000608677 401 ntBASIC3.3□□□□□ -1.88
RETP07949 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RETP07949 U6.107-201ENST00000637108 79 ntBASIC3.3□□□□□ -1.88
RETP07949 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
RETP07949 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.3□□□□□ -1.88
RETP07949 AC022031.1-201ENST00000585985 2593 ntBASIC3.3□□□□□ -1.88
RETP07949 AL513302.2-201ENST00000562313 1842 ntBASIC3.3□□□□□ -1.88
RETP07949 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RETP07949 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms