Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AC103975.1-201ENST00000482506 483 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AC005351.1-201ENST00000511152 786 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AC093755.1-201ENST00000512950 1023 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 RN7SKP132-201ENST00000516001 208 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 RNA5SP367-201ENST00000516557 118 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AC104997.1-201ENST00000519761 717 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 MTND2P26-201ENST00000528255 1029 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 EIF4BP1-201ENST00000554881 351 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AC090425.2-201ENST00000608818 501 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DQB2P05538 RNU6-156P-201ENST00000621869 107 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AC006386.2-201ENST00000624491 75 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 AC012005.1-201ENST00000624575 75 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 FRG1DP-201ENST00000635586 771 ntBASIC2.76□□□□□ -1.97
HLA-DQB2P05538 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DQB2P05538 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DQB2P05538 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 RNA5SP344-201ENST00000411081 104 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 NUP35P2-201ENST00000416748 943 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AL390023.1-201ENST00000428836 262 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 CKS1BP5-201ENST00000434172 273 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 HMGB1P45-201ENST00000435986 653 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC000041.1-201ENST00000439655 175 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 ARPC3P2-201ENST00000457786 533 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC091179.1-201ENST00000461606 579 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC012181.1-201ENST00000479895 423 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 RPL31P13-201ENST00000484151 370 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC097462.2-201ENST00000504623 481 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 SYF2P1-201ENST00000550658 413 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC074029.2-201ENST00000551045 634 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC245128.3-201ENST00000594721 748 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC008277.2-201ENST00000605196 797 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 CR381653.2-201ENST00000624041 768 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 AC084035.1-201ENST00000634543 607 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 FAM157B-203ENST00000639350 358 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.75□□□□□ -1.97
HLA-DQB2P05538 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQB2P05538 MTCO1P24-201ENST00000515438 1558 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 AC109315.1-201ENST00000584143 1347 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 RNU6-152P-201ENST00000384037 107 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 AL356057.3-201ENST00000402607 340 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 RPL23AP47-201ENST00000408017 460 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 RNU4-74P-201ENST00000411280 161 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 AC010385.1-201ENST00000412374 256 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 AC104308.1-201ENST00000454621 333 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 RPL7P5-201ENST00000471472 736 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 SUMO1P1-201ENST00000497904 306 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 AC025459.1-201ENST00000504072 156 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 RNA5SP76-201ENST00000516277 87 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 OR6C73P-201ENST00000546432 358 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 AL163153.1-201ENST00000554223 283 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 AL355836.1-201ENST00000555951 870 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 HMGN2P28-201ENST00000606102 262 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 OR2BH1P-201ENST00000608850 864 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 AC092184.1-201ENST00000625042 715 ntBASIC2.74□□□□□ -1.97
HLA-DQB2P05538 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DQB2P05538 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DQB2P05538 RNU4-23P-201ENST00000362839 140 ntBASIC2.73□□□□□ -1.97
HLA-DQB2P05538 MIR607-201ENST00000385241 96 ntBASIC2.73□□□□□ -1.97
HLA-DQB2P05538 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DQB2P05538 RPS15AP40-201ENST00000419621 391 ntBASIC2.73□□□□□ -1.97
HLA-DQB2P05538 COTL1P1-201ENST00000422309 375 ntBASIC2.73□□□□□ -1.97
HLA-DQB2P05538 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms