Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC112198.4-201ENST00000515450 351 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AP000619.3-201ENST00000535634 1127 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 CCNG2P1-201ENST00000549521 1000 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC023825.1-201ENST00000566704 1030 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 MIR4444-1-201ENST00000581696 74 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 MIR4444-2-201ENST00000584390 74 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 MIR4276-201ENST00000584832 70 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC007687.1-201ENST00000602704 304 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC008739.3-201ENST00000603262 127 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 MTATP6P2-201ENST00000603319 678 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC007566.2-201ENST00000603642 413 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 AC098679.5-201ENST00000624394 571 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 U6.105-201ENST00000637379 88 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DPB1P04440 MTND5P31-201ENST00000419366 1374 ntBASIC2.85□□□□□ -1.95
HLA-DPB1P04440 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 RNA5SP167-201ENST00000365461 116 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 MIR183-201ENST00000384958 110 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 RPL31P1-201ENST00000398116 372 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 SNORA11-201ENST00000408789 128 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 RPL31P2-201ENST00000413849 377 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 TOMM22P1-201ENST00000418578 312 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 SFR1P2-201ENST00000421841 730 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 RPS7P2-201ENST00000435134 607 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 NPM1P49-201ENST00000448027 714 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 Z99714.1-201ENST00000450463 807 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 RPS4XP10-201ENST00000465034 731 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AC093801.2-201ENST00000503966 1050 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AC021678.1-201ENST00000505195 936 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 MTCO1P30-201ENST00000515244 580 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 RNA5SP385-201ENST00000515947 110 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AP000790.1-201ENST00000528891 737 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AC092470.1-201ENST00000546187 132 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 OR6C73P-201ENST00000546432 358 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 NCAPGP2-201ENST00000557911 754 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 RN7SL339P-201ENST00000580597 296 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AC022069.1-201ENST00000582910 658 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AC002487.1-201ENST00000604565 994 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AC019176.2-201ENST00000611579 315 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AL157817.1-201ENST00000614264 790 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AC105227.2-201ENST00000615075 605 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AC012314.7-201ENST00000619693 93 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 AC015967.1-201ENST00000619893 476 ntBASIC2.84□□□□□ -1.95
HLA-DPB1P04440 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DPB1P04440 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.84□□□□□ -1.96
HLA-DPB1P04440 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.84□□□□□ -1.96
HLA-DPB1P04440 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.84□□□□□ -1.96
HLA-DPB1P04440 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-DPB1P04440 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.84□□□□□ -1.96
HLA-DPB1P04440 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC117529.2-201ENST00000512159 2068 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 RPL23AP57-201ENST00000332361 466 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 RNU6-263P-201ENST00000363811 107 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AC234772.1-201ENST00000377927 937 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 MIR7-3-201ENST00000384898 110 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 RNA5SP171-201ENST00000391071 115 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 GSTA8P-201ENST00000404253 637 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 RN7SKP123-201ENST00000410732 291 ntBASIC2.83□□□□□ -1.96
HLA-DPB1P04440 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DPB1P04440 UBE2V1P9-201ENST00000414760 368 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms