Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 TAF9P1-201ENST00000445421 515 ntBASIC1.5□□□□□ -2.17
APOBP04114 TAF9P2-201ENST00000454958 515 ntBASIC1.5□□□□□ -2.17
APOBP04114 OR10D4P-201ENST00000525892 951 ntBASIC1.5□□□□□ -2.17
APOBP04114 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
APOBP04114 AL162578.1-201ENST00000406202 378 ntBASIC1.5□□□□□ -2.17
APOBP04114 RN7SKP285-201ENST00000410137 318 ntBASIC1.5□□□□□ -2.17
APOBP04114 RHEBP3-201ENST00000411920 351 ntBASIC1.5□□□□□ -2.17
APOBP04114 RPS15AP6-201ENST00000420703 385 ntBASIC1.5□□□□□ -2.17
APOBP04114 AC108667.1-201ENST00000428618 249 ntBASIC1.5□□□□□ -2.17
APOBP04114 AC011494.1-201ENST00000596454 237 ntBASIC1.5□□□□□ -2.17
APOBP04114 AP004247.3-201ENST00000608682 624 ntBASIC1.5□□□□□ -2.17
APOBP04114 AC069234.5-201ENST00000611056 416 ntBASIC1.5□□□□□ -2.17
APOBP04114 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
APOBP04114 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
APOBP04114 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.5□□□□□ -2.17
APOBP04114 RPL21P3-201ENST00000395517 478 ntBASIC1.5□□□□□ -2.17
APOBP04114 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.5□□□□□ -2.17
APOBP04114 MIR1276-201ENST00000408707 83 ntBASIC1.5□□□□□ -2.17
APOBP04114 RNA5SP270-201ENST00000411361 118 ntBASIC1.5□□□□□ -2.17
APOBP04114 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.5□□□□□ -2.17
APOBP04114 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC1.5□□□□□ -2.17
APOBP04114 AC123904.3-201ENST00000547218 814 ntBASIC1.5□□□□□ -2.17
APOBP04114 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC1.5□□□□□ -2.17
APOBP04114 AC083760.1-201ENST00000589621 670 ntBASIC1.5□□□□□ -2.17
APOBP04114 MTND5P29-201ENST00000458676 1807 ntBASIC1.5□□□□□ -2.17
APOBP04114 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
APOBP04114 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
APOBP04114 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
APOBP04114 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
APOBP04114 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
APOBP04114 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC1.5□□□□□ -2.17
APOBP04114 MIR4781-201ENST00000585250 76 ntBASIC1.5□□□□□ -2.17
APOBP04114 AL670379.6-201ENST00000603753 252 ntBASIC1.5□□□□□ -2.17
APOBP04114 AL670379.11-201ENST00000604059 253 ntBASIC1.5□□□□□ -2.17
APOBP04114 AL670379.10-201ENST00000604330 253 ntBASIC1.5□□□□□ -2.17
APOBP04114 AC008162.1-201ENST00000604718 254 ntBASIC1.5□□□□□ -2.17
APOBP04114 AL670379.1-201ENST00000604752 252 ntBASIC1.5□□□□□ -2.17
APOBP04114 AL670379.2-201ENST00000604983 252 ntBASIC1.5□□□□□ -2.17
APOBP04114 AL670379.5-201ENST00000605253 252 ntBASIC1.5□□□□□ -2.17
APOBP04114 AL670379.4-201ENST00000605279 254 ntBASIC1.5□□□□□ -2.17
APOBP04114 AL670379.12-201ENST00000605291 253 ntBASIC1.5□□□□□ -2.17
APOBP04114 AL670379.8-201ENST00000605353 252 ntBASIC1.5□□□□□ -2.17
APOBP04114 AL670379.9-201ENST00000605428 253 ntBASIC1.5□□□□□ -2.17
APOBP04114 AL670379.7-201ENST00000605823 252 ntBASIC1.5□□□□□ -2.17
APOBP04114 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
APOBP04114 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
APOBP04114 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
APOBP04114 RNU6-321P-201ENST00000410912 106 ntBASIC1.49□□□□□ -2.17
APOBP04114 AC004987.3-201ENST00000413879 771 ntBASIC1.49□□□□□ -2.17
APOBP04114 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.49□□□□□ -2.17
APOBP04114 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.49□□□□□ -2.17
APOBP04114 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.49□□□□□ -2.17
APOBP04114 AL591516.1-201ENST00000611326 274 ntBASIC1.49□□□□□ -2.17
APOBP04114 AC008432.1-201ENST00000615912 1320 ntBASIC1.49□□□□□ -2.17
APOBP04114 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC1.49□□□□□ -2.17
APOBP04114 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.49□□□□□ -2.17
APOBP04114 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
APOBP04114 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
APOBP04114 AC080128.1-201ENST00000474389 1917 ntBASIC1.49□□□□□ -2.17
APOBP04114 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
APOBP04114 RNU1-73P-201ENST00000383971 164 ntBASIC1.49□□□□□ -2.17
APOBP04114 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
APOBP04114 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
APOBP04114 AL035551.1-201ENST00000446931 348 ntBASIC1.49□□□□□ -2.17
APOBP04114 AC107222.1-201ENST00000510899 637 ntBASIC1.49□□□□□ -2.17
APOBP04114 AP003385.6-201ENST00000531603 374 ntBASIC1.49□□□□□ -2.17
APOBP04114 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.49□□□□□ -2.17
APOBP04114 AC122134.1-201ENST00000565664 1104 ntBASIC1.49□□□□□ -2.17
APOBP04114 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC1.49□□□□□ -2.17
APOBP04114 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC1.49□□□□□ -2.17
APOBP04114 AC128687.1-201ENST00000605304 619 ntBASIC1.49□□□□□ -2.17
APOBP04114 AP001521.1-201ENST00000609150 300 ntBASIC1.49□□□□□ -2.17
APOBP04114 MIR6733-201ENST00000635723 61 ntBASIC1.49□□□□□ -2.17
APOBP04114 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
APOBP04114 CUL1P1-201ENST00000509510 2425 ntBASIC1.49□□□□□ -2.17
APOBP04114 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC1.49□□□□□ -2.17
APOBP04114 AC092881.1-201ENST00000638218 2733 ntBASIC1.49□□□□□ -2.17
APOBP04114 AL359893.1-201ENST00000447628 1580 ntBASIC1.49□□□□□ -2.17
APOBP04114 RN7SKP44-201ENST00000363602 316 ntBASIC1.49□□□□□ -2.17
APOBP04114 B3GALNT1P1-201ENST00000420569 975 ntBASIC1.49□□□□□ -2.17
APOBP04114 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.49□□□□□ -2.17
APOBP04114 AC117522.2-201ENST00000510049 657 ntBASIC1.49□□□□□ -2.17
APOBP04114 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC1.49□□□□□ -2.17
APOBP04114 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC1.49□□□□□ -2.17
APOBP04114 NPM1P35-201ENST00000533043 868 ntBASIC1.49□□□□□ -2.17
APOBP04114 GNAI2P1-201ENST00000541815 315 ntBASIC1.49□□□□□ -2.17
APOBP04114 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.49□□□□□ -2.17
APOBP04114 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
APOBP04114 AC011460.1-201ENST00000636268 1834 ntBASIC1.49□□□□□ -2.17
APOBP04114 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
APOBP04114 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
APOBP04114 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
APOBP04114 SNORA26.9-201ENST00000391322 122 ntBASIC1.49□□□□□ -2.17
APOBP04114 EI24P2-201ENST00000397776 1076 ntBASIC1.49□□□□□ -2.17
APOBP04114 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC1.49□□□□□ -2.17
APOBP04114 SNRPGP18-201ENST00000553000 214 ntBASIC1.49□□□□□ -2.17
APOBP04114 MIR3186-201ENST00000577404 85 ntBASIC1.49□□□□□ -2.17
APOBP04114 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
APOBP04114 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
APOBP04114 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms