Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNA5SP453-201ENST00000362503 119 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 SNORA64.1-201ENST00000362600 132 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 RNU6-989P-201ENST00000362756 107 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 RNA5SP375-201ENST00000362975 119 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 Y_RNA.148-201ENST00000363557 117 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 SMIM11P1-201ENST00000369586 178 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFAP04085 RNU6-1040P-201ENST00000383974 107 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 RNU6-574P-201ENST00000384265 107 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 Y_RNA.493-201ENST00000384422 102 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PDGFAP04085 CYB5AP4-201ENST00000396692 399 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 MIR937-201ENST00000401271 86 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.55□□□□□ -1.52
PDGFAP04085 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.55□□□□□ -1.52
PDGFAP04085 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFAP04085 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.55□□□□□ -1.52
PDGFAP04085 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 GEMIN8P3-201ENST00000445417 720 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 FABP5P13-201ENST00000452144 328 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 DYNLL1P5-201ENST00000467158 270 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 RN7SL799P-201ENST00000475891 298 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.55□□□□□ -1.52
PDGFAP04085 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFAP04085 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.55□□□□□ -1.52
PDGFAP04085 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.55□□□□□ -1.52
PDGFAP04085 IGKV2-18-201ENST00000522607 343 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFAP04085 RNU4ATAC-201ENST00000580972 127 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 AC233702.7-202ENST00000582941 211 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFAP04085 ATP1B3P1-201ENST00000605365 821 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 AL021918.2-201ENST00000613415 194 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 AL355365.1-201ENST00000616480 294 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 AC087588.2-201ENST00000617667 426 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFAP04085 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFAP04085 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFAP04085 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFAP04085 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFAP04085 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFAP04085 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFAP04085 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PDGFAP04085 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFAP04085 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
PDGFAP04085 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
PDGFAP04085 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFAP04085 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFAP04085 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFAP04085 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
PDGFAP04085 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFAP04085 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFAP04085 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFAP04085 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFAP04085 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFAP04085 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFAP04085 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFAP04085 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFAP04085 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PDGFAP04085 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
PDGFAP04085 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFAP04085 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFAP04085 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PDGFAP04085 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFAP04085 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDGFAP04085 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFAP04085 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.54□□□□□ -1.52
PDGFAP04085 RNU6-562P-201ENST00000362731 107 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 RNA5SP478-201ENST00000364657 115 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 RNU6-178P-201ENST00000384631 104 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 RPS12P24-201ENST00000412619 387 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFAP04085 ELOCP18-201ENST00000434209 337 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 AL163193.1-201ENST00000444895 788 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.54□□□□□ -1.52
PDGFAP04085 AC016027.4-201ENST00000450866 277 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 HMGB3P21-201ENST00000452483 547 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 AC006539.1-201ENST00000481419 501 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFAP04085 RPL7P23-201ENST00000493874 747 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 RN7SL466P-201ENST00000497546 295 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 AC026801.2-201ENST00000515352 425 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 HIGD1AP3-201ENST00000515857 278 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 RNU6-1016P-201ENST00000516689 94 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 AP003122.3-201ENST00000526316 255 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.54□□□□□ -1.52
PDGFAP04085 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.54□□□□□ -1.52
PDGFAP04085 AC090115.3-201ENST00000553218 849 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFAP04085 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFAP04085 AC004817.2-201ENST00000561794 651 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 MIR3668-201ENST00000582138 75 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 7SK.7-201ENST00000603504 247 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 FO393422.1-201ENST00000603908 708 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 AC124312.5-201ENST00000604451 268 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 AC211433.2-201ENST00000608433 387 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 AC024255.1-201ENST00000614376 102 ntBASIC5.54□□□□□ -1.52
PDGFAP04085 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFAP04085 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms