Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VTNP04004 RNU1-18P-201ENST00000363062 164 ntBASIC3.77□□□□□ -1.81
VTNP04004 RNU6-619P-201ENST00000365146 108 ntBASIC3.77□□□□□ -1.81
VTNP04004 Y_RNA.465-201ENST00000384293 102 ntBASIC3.77□□□□□ -1.81
VTNP04004 RNU6-1151P-201ENST00000384684 107 ntBASIC3.77□□□□□ -1.81
VTNP04004 SNORD65.1-201ENST00000390889 71 ntBASIC3.77□□□□□ -1.81
VTNP04004 RPL23AP48-201ENST00000406913 488 ntBASIC3.77□□□□□ -1.81
VTNP04004 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.77□□□□□ -1.81
VTNP04004 AL008987.1-201ENST00000415528 237 ntBASIC3.77□□□□□ -1.81
VTNP04004 NUP35P2-201ENST00000416748 943 ntBASIC3.77□□□□□ -1.81
VTNP04004 HMGB1P49-201ENST00000418882 569 ntBASIC3.77□□□□□ -1.81
VTNP04004 AC006989.1-201ENST00000427212 131 ntBASIC3.77□□□□□ -1.81
VTNP04004 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.77□□□□□ -1.81
VTNP04004 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.77□□□□□ -1.81
VTNP04004 GTF2IP7-202ENST00000436677 309 ntBASIC3.77□□□□□ -1.81
VTNP04004 RPL23AP76-201ENST00000441860 458 ntBASIC3.77□□□□□ -1.81
VTNP04004 NDUFA5P7-201ENST00000452914 242 ntBASIC3.77□□□□□ -1.81
VTNP04004 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.77□□□□□ -1.81
VTNP04004 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.77□□□□□ -1.81
VTNP04004 RN7SL93P-201ENST00000463035 293 ntBASIC3.77□□□□□ -1.81
VTNP04004 AC011979.1-201ENST00000472300 483 ntBASIC3.77□□□□□ -1.81
VTNP04004 AC108734.3-201ENST00000481241 1165 ntBASIC3.77□□□□□ -1.81
VTNP04004 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.77□□□□□ -1.81
VTNP04004 VPS26AP1-201ENST00000483197 979 ntBASIC3.77□□□□□ -1.81
VTNP04004 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.77□□□□□ -1.81
VTNP04004 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.77□□□□□ -1.81
VTNP04004 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.77□□□□□ -1.81
VTNP04004 FCF1P8-201ENST00000510322 597 ntBASIC3.77□□□□□ -1.81
VTNP04004 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.77□□□□□ -1.81
VTNP04004 MTND2P26-201ENST00000528255 1029 ntBASIC3.77□□□□□ -1.81
VTNP04004 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
VTNP04004 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VTNP04004 AC026333.2-201ENST00000542164 106 ntBASIC3.77□□□□□ -1.81
VTNP04004 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.77□□□□□ -1.81
VTNP04004 EIF5A2P1-201ENST00000564027 460 ntBASIC3.77□□□□□ -1.81
VTNP04004 AP001180.3-201ENST00000582221 145 ntBASIC3.77□□□□□ -1.81
VTNP04004 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.77□□□□□ -1.81
VTNP04004 NIFKP6-201ENST00000598115 845 ntBASIC3.77□□□□□ -1.81
VTNP04004 Z99289.3-201ENST00000605586 594 ntBASIC3.77□□□□□ -1.81
VTNP04004 AP003117.2-201ENST00000606010 545 ntBASIC3.77□□□□□ -1.81
VTNP04004 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.77□□□□□ -1.81
VTNP04004 MIR7112-201ENST00000616126 65 ntBASIC3.77□□□□□ -1.81
VTNP04004 AC067852.7-201ENST00000623270 535 ntBASIC3.77□□□□□ -1.81
VTNP04004 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.77□□□□□ -1.81
VTNP04004 MAPK10-373ENST00000641983 6772 ntBASIC3.77□□□□□ -1.81
VTNP04004 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
VTNP04004 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
VTNP04004 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VTNP04004 AC007390.2-201ENST00000606229 3803 ntBASIC3.76□□□□□ -1.81
VTNP04004 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
VTNP04004 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.76□□□□□ -1.81
VTNP04004 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VTNP04004 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
VTNP04004 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VTNP04004 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VTNP04004 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VTNP04004 RNU6-582P-201ENST00000362989 107 ntBASIC3.76□□□□□ -1.81
VTNP04004 RNA5SP322-201ENST00000363617 119 ntBASIC3.76□□□□□ -1.81
VTNP04004 RNU6-525P-201ENST00000363685 104 ntBASIC3.76□□□□□ -1.81
VTNP04004 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.76□□□□□ -1.81
VTNP04004 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VTNP04004 RPL17P50-201ENST00000396131 546 ntBASIC3.76□□□□□ -1.81
VTNP04004 RPS12P23-201ENST00000419579 400 ntBASIC3.76□□□□□ -1.81
VTNP04004 MTND2P16-201ENST00000419987 799 ntBASIC3.76□□□□□ -1.81
VTNP04004 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.76□□□□□ -1.81
VTNP04004 AC007435.1-201ENST00000421086 415 ntBASIC3.76□□□□□ -1.81
VTNP04004 MRPS36P1-201ENST00000421291 307 ntBASIC3.76□□□□□ -1.81
VTNP04004 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.76□□□□□ -1.81
VTNP04004 AC091862.1-201ENST00000438016 1100 ntBASIC3.76□□□□□ -1.81
VTNP04004 SKP1P1-201ENST00000438081 489 ntBASIC3.76□□□□□ -1.81
VTNP04004 AC115115.1-201ENST00000449927 248 ntBASIC3.76□□□□□ -1.81
VTNP04004 snoU13.7-201ENST00000459220 104 ntBASIC3.76□□□□□ -1.81
VTNP04004 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.76□□□□□ -1.81
VTNP04004 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.76□□□□□ -1.81
VTNP04004 AC087385.1-201ENST00000475062 312 ntBASIC3.76□□□□□ -1.81
VTNP04004 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.76□□□□□ -1.81
VTNP04004 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.76□□□□□ -1.81
VTNP04004 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.76□□□□□ -1.81
VTNP04004 AC093755.1-201ENST00000512950 1023 ntBASIC3.76□□□□□ -1.81
VTNP04004 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.76□□□□□ -1.81
VTNP04004 AP006245.1-201ENST00000522549 120 ntBASIC3.76□□□□□ -1.81
VTNP04004 AP000926.4-201ENST00000527351 454 ntBASIC3.76□□□□□ -1.81
VTNP04004 MTCO2P15-201ENST00000532655 656 ntBASIC3.76□□□□□ -1.81
VTNP04004 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.76□□□□□ -1.81
VTNP04004 UBE2NP1-201ENST00000545592 458 ntBASIC3.76□□□□□ -1.81
VTNP04004 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.76□□□□□ -1.81
VTNP04004 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.76□□□□□ -1.81
VTNP04004 AC090888.2-201ENST00000559765 1144 ntBASIC3.76□□□□□ -1.81
VTNP04004 AC090695.1-201ENST00000561269 1222 ntBASIC3.76□□□□□ -1.81
VTNP04004 MIR4276-201ENST00000584832 70 ntBASIC3.76□□□□□ -1.81
VTNP04004 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.76□□□□□ -1.81
VTNP04004 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.76□□□□□ -1.81
VTNP04004 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.76□□□□□ -1.81
VTNP04004 AL357094.1-201ENST00000603845 844 ntBASIC3.76□□□□□ -1.81
VTNP04004 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.76□□□□□ -1.81
VTNP04004 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.76□□□□□ -1.81
VTNP04004 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.76□□□□□ -1.81
VTNP04004 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.76□□□□□ -1.81
VTNP04004 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.76□□□□□ -1.81
VTNP04004 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms