Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC092326.2-201ENST00000624772 1561 ntBASIC3.63□□□□□ -1.83
CHRNA1P02708 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHRNA1P02708 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.62□□□□□ -1.83
CHRNA1P02708 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA1P02708 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA1P02708 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA1P02708 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA1P02708 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA1P02708 PABPC1P7-201ENST00000413177 1513 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 SNORA63.3-201ENST00000362682 132 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 RNU6-354P-201ENST00000383862 107 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 U6.112-201ENST00000384129 70 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 RNU6-610P-201ENST00000384264 107 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CHRNA1P02708 RNU6-932P-201ENST00000391108 106 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 SSXP10-201ENST00000402595 565 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.62□□□□□ -1.83
CHRNA1P02708 AL512637.2-201ENST00000431287 1256 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.62□□□□□ -1.83
CHRNA1P02708 HMGB1P12-201ENST00000438594 598 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 OR51B8P-201ENST00000449892 769 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 CDC42P1-201ENST00000456658 548 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 RPL27AP5-201ENST00000469428 449 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 AC109925.1-201ENST00000478069 331 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.62□□□□□ -1.83
CHRNA1P02708 AC016550.1-201ENST00000505348 785 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 HIGD1AP3-201ENST00000515857 278 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 SNORA70.19-201ENST00000516717 90 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 RN7SKP116-201ENST00000516902 319 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 RPL12P22-201ENST00000519073 490 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.62□□□□□ -1.83
CHRNA1P02708 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.62□□□□□ -1.83
CHRNA1P02708 OR8K4P-201ENST00000534608 872 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 EIF4BP1-201ENST00000554881 351 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 AC090079.2-201ENST00000575289 768 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.62□□□□□ -1.83
CHRNA1P02708 AC016542.1-201ENST00000608259 493 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.62□□□□□ -1.83
CHRNA1P02708 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CHRNA1P02708 RNVU1-4-201ENST00000612985 164 ntBASIC3.62□□□□□ -1.83
CHRNA1P02708 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CHRNA1P02708 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRNA1P02708 AL513302.2-201ENST00000562313 1842 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA1P02708 RNU6-600P-201ENST00000362524 99 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 RNU1-70P-201ENST00000362618 164 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 SNORA51.2-201ENST00000364595 132 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 RNU6-468P-201ENST00000384003 109 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRNA1P02708 AC096632.1-201ENST00000427395 310 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.61□□□□□ -1.83
CHRNA1P02708 RAB11AP1-201ENST00000442978 646 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 AL592437.1-201ENST00000443781 492 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRNA1P02708 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA1P02708 NAP1L1P3-201ENST00000462291 880 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 AC004801.2-202ENST00000463559 283 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 RPS17P11-201ENST00000474297 293 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 AC092902.1-201ENST00000486999 259 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 HMGB3P15-201ENST00000507326 574 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRNA1P02708 RNU6-416P-201ENST00000516265 103 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.61□□□□□ -1.83
CHRNA1P02708 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.61□□□□□ -1.83
CHRNA1P02708 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.61□□□□□ -1.83
CHRNA1P02708 AC004024.1-201ENST00000549244 247 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 AC004217.3-201ENST00000551552 878 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.61□□□□□ -1.83
CHRNA1P02708 NIFKP8-201ENST00000560500 874 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 MIR3908-201ENST00000579798 126 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.61□□□□□ -1.83
CHRNA1P02708 AP004247.3-201ENST00000608682 624 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA1P02708 AC018926.1-201ENST00000616335 435 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 AC138932.5-201ENST00000617759 563 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 SCARNA15.3-201ENST00000626315 122 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 SCARNA4.1-201ENST00000628597 123 ntBASIC3.61□□□□□ -1.83
CHRNA1P02708 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.61□□□□□ -1.83
CHRNA1P02708 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.61□□□□□ -1.83
CHRNA1P02708 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA1P02708 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CHRNA1P02708 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CHRNA1P02708 CEP170P1-201ENST00000502249 4587 ntBASIC3.6□□□□□ -1.83
CHRNA1P02708 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNA1P02708 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CHRNA1P02708 AC005183.1-201ENST00000603687 1979 ntBASIC3.6□□□□□ -1.83
CHRNA1P02708 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNA1P02708 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNA1P02708 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRNA1P02708 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CHRNA1P02708 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNA1P02708 OR51A3P-201ENST00000413596 924 ntBASIC3.6□□□□□ -1.83
CHRNA1P02708 MTCYBP24-201ENST00000420387 1106 ntBASIC3.6□□□□□ -1.83
CHRNA1P02708 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRNA1P02708 AL353705.1-201ENST00000433468 480 ntBASIC3.6□□□□□ -1.83
CHRNA1P02708 RSL24D1P3-201ENST00000449255 495 ntBASIC3.6□□□□□ -1.83
CHRNA1P02708 PTGES3P5-201ENST00000455109 434 ntBASIC3.6□□□□□ -1.83
CHRNA1P02708 TMEM248P1-201ENST00000510579 951 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms