Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RPL23AP31-201ENST00000456160 467 ntBASIC2.57□□□□□ -2
TNFP01375 ATG10-AS1-201ENST00000504846 648 ntBASIC2.57□□□□□ -2
TNFP01375 RNA5SP282-201ENST00000516355 108 ntBASIC2.57□□□□□ -2
TNFP01375 SNORA31.26-201ENST00000517250 137 ntBASIC2.57□□□□□ -2
TNFP01375 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.57□□□□□ -2
TNFP01375 AC007536.1-201ENST00000533382 349 ntBASIC2.57□□□□□ -2
TNFP01375 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.57□□□□□ -2
TNFP01375 AL391156.1-201ENST00000554965 554 ntBASIC2.57□□□□□ -2
TNFP01375 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.57□□□□□ -2
TNFP01375 AP005205.1-201ENST00000563503 508 ntBASIC2.57□□□□□ -2
TNFP01375 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.57□□□□□ -2
TNFP01375 AC006116.7-201ENST00000590141 756 ntBASIC2.57□□□□□ -2
TNFP01375 AC024023.1-201ENST00000624530 922 ntBASIC2.57□□□□□ -2
TNFP01375 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
TNFP01375 API5P2-201ENST00000397055 1498 ntBASIC2.57□□□□□ -2
TNFP01375 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.57□□□□□ -2
TNFP01375 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.56□□□□□ -2
TNFP01375 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.56□□□□□ -2
TNFP01375 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.56□□□□□ -2
TNFP01375 RNU6-1331P-201ENST00000363658 106 ntBASIC2.56□□□□□ -2
TNFP01375 RNU6-301P-201ENST00000384277 107 ntBASIC2.56□□□□□ -2
TNFP01375 MIR153-1-201ENST00000384914 90 ntBASIC2.56□□□□□ -2
TNFP01375 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.56□□□□□ -2
TNFP01375 AL034374.1-201ENST00000406329 351 ntBASIC2.56□□□□□ -2
TNFP01375 AL354719.1-201ENST00000406535 843 ntBASIC2.56□□□□□ -2
TNFP01375 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.56□□□□□ -2
TNFP01375 AC093084.1-201ENST00000424233 687 ntBASIC2.56□□□□□ -2
TNFP01375 AL513328.1-201ENST00000446460 224 ntBASIC2.56□□□□□ -2
TNFP01375 AC069277.2-201ENST00000454211 432 ntBASIC2.56□□□□□ -2
TNFP01375 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.56□□□□□ -2
TNFP01375 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.56□□□□□ -2
TNFP01375 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.56□□□□□ -2
TNFP01375 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.56□□□□□ -2
TNFP01375 UBTFL10-201ENST00000528532 562 ntBASIC2.56□□□□□ -2
TNFP01375 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.56□□□□□ -2
TNFP01375 AL133271.1-201ENST00000538229 291 ntBASIC2.56□□□□□ -2
TNFP01375 CKS1BP1-201ENST00000555221 240 ntBASIC2.56□□□□□ -2
TNFP01375 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.56□□□□□ -2
TNFP01375 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.56□□□□□ -2
TNFP01375 AC027807.1-201ENST00000559921 996 ntBASIC2.56□□□□□ -2
TNFP01375 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.56□□□□□ -2
TNFP01375 MIR4474-201ENST00000579189 78 ntBASIC2.56□□□□□ -2
TNFP01375 MIR4298-201ENST00000584380 73 ntBASIC2.56□□□□□ -2
TNFP01375 RNA5SP108-201ENST00000605921 117 ntBASIC2.56□□□□□ -2
TNFP01375 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
TNFP01375 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.56□□□□□ -2
TNFP01375 AC243829.7-201ENST00000633081 225 ntBASIC2.56□□□□□ -2
TNFP01375 AC010149.2-201ENST00000637608 315 ntBASIC2.56□□□□□ -2
TNFP01375 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.56□□□□□ -2
TNFP01375 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
TNFP01375 AC046144.1-201ENST00000478559 1853 ntBASIC2.56□□□□□ -2
TNFP01375 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.55□□□□□ -2
TNFP01375 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TNFP01375 U3.12-201ENST00000364498 214 ntBASIC2.55□□□□□ -2
TNFP01375 RNA5SP126-201ENST00000365092 109 ntBASIC2.55□□□□□ -2
TNFP01375 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.55□□□□□ -2
TNFP01375 EIF5P1-201ENST00000400019 1231 ntBASIC2.55□□□□□ -2
TNFP01375 RNA5SP508-201ENST00000411327 119 ntBASIC2.55□□□□□ -2
TNFP01375 USP9YP20-201ENST00000419224 558 ntBASIC2.55□□□□□ -2
TNFP01375 YPEL5P1-201ENST00000419731 367 ntBASIC2.55□□□□□ -2
TNFP01375 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.55□□□□□ -2
TNFP01375 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.55□□□□□ -2
TNFP01375 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.55□□□□□ -2
TNFP01375 AL353898.1-201ENST00000444055 238 ntBASIC2.55□□□□□ -2
TNFP01375 RPS3P1-201ENST00000456781 192 ntBASIC2.55□□□□□ -2
TNFP01375 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.55□□□□□ -2
TNFP01375 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.55□□□□□ -2
TNFP01375 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.55□□□□□ -2
TNFP01375 AP001646.1-201ENST00000527936 915 ntBASIC2.55□□□□□ -2
TNFP01375 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.55□□□□□ -2
TNFP01375 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.55□□□□□ -2
TNFP01375 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.55□□□□□ -2
TNFP01375 AL157700.1-201ENST00000561973 1432 ntBASIC2.55□□□□□ -2
TNFP01375 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.55□□□□□ -2
TNFP01375 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.55□□□□□ -2
TNFP01375 AC109315.1-201ENST00000584143 1347 ntBASIC2.55□□□□□ -2
TNFP01375 AC010928.3-201ENST00000587712 541 ntBASIC2.55□□□□□ -2
TNFP01375 AC096586.2-201ENST00000610260 441 ntBASIC2.55□□□□□ -2
TNFP01375 AC105429.2-201ENST00000610567 517 ntBASIC2.55□□□□□ -2
TNFP01375 AC073348.1-201ENST00000623002 331 ntBASIC2.55□□□□□ -2
TNFP01375 AC145207.9-201ENST00000623802 325 ntBASIC2.55□□□□□ -2
TNFP01375 AP003072.4-201ENST00000624580 310 ntBASIC2.55□□□□□ -2
TNFP01375 AC084035.1-201ENST00000634543 607 ntBASIC2.55□□□□□ -2
TNFP01375 LRRC77P-213ENST00000637727 880 ntBASIC2.55□□□□□ -2
TNFP01375 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.55□□□□□ -2
TNFP01375 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.55□□□□□ -2
TNFP01375 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.55□□□□□ -2
TNFP01375 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.54□□□□□ -2
TNFP01375 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
TNFP01375 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
TNFP01375 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
TNFP01375 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TNFP01375 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
TNFP01375 AL355379.1-201ENST00000405542 640 ntBASIC2.54□□□□□ -2
TNFP01375 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.54□□□□□ -2
TNFP01375 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.54□□□□□ -2
TNFP01375 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.54□□□□□ -2
TNFP01375 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.54□□□□□ -2
TNFP01375 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.54□□□□□ -2
TNFP01375 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms