Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC025459.1-201ENST00000504072 156 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.21□□□□□ -1.9
CTDNEP1O95476 RN7SKP234-201ENST00000517173 224 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 AC010306.1-201ENST00000523223 1117 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.21□□□□□ -1.9
CTDNEP1O95476 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.21□□□□□ -1.9
CTDNEP1O95476 AL049870.4-201ENST00000555741 486 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 AL355836.1-201ENST00000555951 870 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.21□□□□□ -1.9
CTDNEP1O95476 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.21□□□□□ -1.9
CTDNEP1O95476 MIR3605-201ENST00000583214 100 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 CBX3P2-202ENST00000583365 535 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.21□□□□□ -1.9
CTDNEP1O95476 KATNBL1P5-201ENST00000605015 517 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 RPL21P136-201ENST00000605378 396 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.21□□□□□ -1.9
CTDNEP1O95476 AC112503.1-201ENST00000608436 391 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.21□□□□□ -1.9
CTDNEP1O95476 MIR6733-201ENST00000635723 61 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 ZNF833P-201ENST00000424938 1494 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.21□□□□□ -1.9
CTDNEP1O95476 AC092326.2-201ENST00000624772 1561 ntBASIC3.21□□□□□ -1.9
CTDNEP1O95476 SAGE4P-201ENST00000442271 3381 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTDNEP1O95476 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.2□□□□□ -1.9
CTDNEP1O95476 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CTDNEP1O95476 RNU6-252P-201ENST00000363232 107 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTDNEP1O95476 RNU4-31P-201ENST00000384211 141 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 SNORA40.4-201ENST00000390971 128 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 AL590290.1-201ENST00000405336 380 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC008280.1-201ENST00000418851 412 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.2□□□□□ -1.9
CTDNEP1O95476 MRPL50P4-201ENST00000446432 475 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC140076.1-201ENST00000449897 361 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.2□□□□□ -1.9
CTDNEP1O95476 RPL37P6-202ENST00000464216 403 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.2□□□□□ -1.9
CTDNEP1O95476 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.2□□□□□ -1.9
CTDNEP1O95476 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC233266.2-201ENST00000567067 528 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC006504.3-201ENST00000586818 523 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.2□□□□□ -1.9
CTDNEP1O95476 ZNF92P2-201ENST00000600543 1059 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC005776.1-201ENST00000603164 290 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC011468.4-201ENST00000603942 409 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 AL161756.2-201ENST00000604597 246 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 AL033523.1-201ENST00000605153 153 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC090425.2-201ENST00000608818 501 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 MIR1264-201ENST00000616374 69 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 AP004607.9-201ENST00000618202 316 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.2□□□□□ -1.9
CTDNEP1O95476 AC006111.3-201ENST00000622137 383 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 CR381653.2-201ENST00000624041 768 ntBASIC3.2□□□□□ -1.9
CTDNEP1O95476 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.2□□□□□ -1.9
CTDNEP1O95476 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTDNEP1O95476 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTDNEP1O95476 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.19□□□□□ -1.9
CTDNEP1O95476 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTDNEP1O95476 MIR26A1-201ENST00000362205 77 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 Y_RNA.333-201ENST00000365274 102 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 RNU6-356P-201ENST00000384140 107 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 RNU2-72P-201ENST00000411175 163 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 XKRYP4-201ENST00000414395 483 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC006946.1-201ENST00000429106 328 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 ARL5AP2-201ENST00000444698 533 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 NANOGNBP1-201ENST00000448444 480 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 XKRYP5-201ENST00000449659 483 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC146507.1-201ENST00000468335 354 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.19□□□□□ -1.9
CTDNEP1O95476 MTND3P24-201ENST00000506306 329 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.19□□□□□ -1.9
CTDNEP1O95476 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.19□□□□□ -1.9
CTDNEP1O95476 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC007954.1-201ENST00000554198 494 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.19□□□□□ -1.9
CTDNEP1O95476 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.19□□□□□ -1.9
CTDNEP1O95476 BNIP3P33-201ENST00000598912 569 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.19□□□□□ -1.9
CTDNEP1O95476 AL392112.1-201ENST00000605115 829 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC093732.2-201ENST00000607950 274 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC005156.1-201ENST00000613371 573 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.19□□□□□ -1.9
CTDNEP1O95476 AL512283.1-201ENST00000606756 1384 ntBASIC3.19□□□□□ -1.9
CTDNEP1O95476 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTDNEP1O95476 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTDNEP1O95476 AC108206.1-201ENST00000570186 4159 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms