Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AP001086.1-201ENST00000494882 321 ntBASIC3.73□□□□□ -1.81
SIX3O95343 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX3O95343 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX3O95343 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX3O95343 MLLT10P2-201ENST00000506434 249 ntBASIC3.73□□□□□ -1.81
SIX3O95343 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX3O95343 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SIX3O95343 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX3O95343 AC008837.2-201ENST00000513076 418 ntBASIC3.73□□□□□ -1.81
SIX3O95343 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX3O95343 RNA5SP315-201ENST00000516340 116 ntBASIC3.73□□□□□ -1.81
SIX3O95343 RNA5SP312-201ENST00000517068 116 ntBASIC3.73□□□□□ -1.81
SIX3O95343 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX3O95343 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SIX3O95343 AC091515.1-201ENST00000548110 679 ntBASIC3.73□□□□□ -1.81
SIX3O95343 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.73□□□□□ -1.81
SIX3O95343 AC023813.2-201ENST00000564321 469 ntBASIC3.73□□□□□ -1.81
SIX3O95343 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX3O95343 AC099489.2-201ENST00000574976 260 ntBASIC3.73□□□□□ -1.81
SIX3O95343 MIR4637-201ENST00000582405 84 ntBASIC3.73□□□□□ -1.81
SIX3O95343 RPP40P2-201ENST00000603596 712 ntBASIC3.73□□□□□ -1.81
SIX3O95343 AC010738.1-201ENST00000604970 987 ntBASIC3.73□□□□□ -1.81
SIX3O95343 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.73□□□□□ -1.81
SIX3O95343 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX3O95343 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.73□□□□□ -1.81
SIX3O95343 MIR6500-201ENST00000622700 86 ntBASIC3.73□□□□□ -1.81
SIX3O95343 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SIX3O95343 AC112484.5-201ENST00000624189 228 ntBASIC3.73□□□□□ -1.81
SIX3O95343 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX3O95343 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SIX3O95343 AF127577.6-201ENST00000623352 2191 ntBASIC3.73□□□□□ -1.81
SIX3O95343 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SIX3O95343 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.73□□□□□ -1.81
SIX3O95343 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX3O95343 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX3O95343 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX3O95343 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX3O95343 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SIX3O95343 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX3O95343 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX3O95343 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX3O95343 RNU6-560P-201ENST00000364007 108 ntBASIC3.72□□□□□ -1.81
SIX3O95343 SNORD3H-201ENST00000384486 214 ntBASIC3.72□□□□□ -1.81
SIX3O95343 RNU6-636P-201ENST00000384598 107 ntBASIC3.72□□□□□ -1.81
SIX3O95343 MIR200C-201ENST00000384980 68 ntBASIC3.72□□□□□ -1.81
SIX3O95343 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.72□□□□□ -1.81
SIX3O95343 RNA5SP129-201ENST00000410276 118 ntBASIC3.72□□□□□ -1.81
SIX3O95343 RNU6-628P-201ENST00000410675 107 ntBASIC3.72□□□□□ -1.81
SIX3O95343 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX3O95343 RPL21P109-201ENST00000422213 475 ntBASIC3.72□□□□□ -1.81
SIX3O95343 AC013410.2-201ENST00000422627 201 ntBASIC3.72□□□□□ -1.81
SIX3O95343 RPL7P28-201ENST00000437739 740 ntBASIC3.72□□□□□ -1.81
SIX3O95343 MTND4P6-201ENST00000438297 472 ntBASIC3.72□□□□□ -1.81
SIX3O95343 AL162151.2-201ENST00000448875 158 ntBASIC3.72□□□□□ -1.81
SIX3O95343 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX3O95343 SLC31A1P1-201ENST00000451221 567 ntBASIC3.72□□□□□ -1.81
SIX3O95343 BTF3P5-201ENST00000457252 467 ntBASIC3.72□□□□□ -1.81
SIX3O95343 AC026410.2-201ENST00000460281 156 ntBASIC3.72□□□□□ -1.81
SIX3O95343 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX3O95343 RPS7P7-201ENST00000463499 571 ntBASIC3.72□□□□□ -1.81
SIX3O95343 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX3O95343 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SIX3O95343 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SIX3O95343 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
SIX3O95343 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SIX3O95343 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX3O95343 RN7SKP157-201ENST00000516174 282 ntBASIC3.72□□□□□ -1.81
SIX3O95343 AC022695.1-201ENST00000522089 237 ntBASIC3.72□□□□□ -1.81
SIX3O95343 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX3O95343 HIGD1AP17-201ENST00000554576 276 ntBASIC3.72□□□□□ -1.81
SIX3O95343 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
SIX3O95343 AC120057.2-201ENST00000571520 271 ntBASIC3.72□□□□□ -1.81
SIX3O95343 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.72□□□□□ -1.81
SIX3O95343 AP001269.3-201ENST00000588718 329 ntBASIC3.72□□□□□ -1.81
SIX3O95343 BNIP3P40-201ENST00000596017 556 ntBASIC3.72□□□□□ -1.81
SIX3O95343 AC015726.1-201ENST00000602353 681 ntBASIC3.72□□□□□ -1.81
SIX3O95343 AC011458.1-201ENST00000604034 617 ntBASIC3.72□□□□□ -1.81
SIX3O95343 AL592436.1-201ENST00000605135 558 ntBASIC3.72□□□□□ -1.81
SIX3O95343 AC024933.1-201ENST00000608472 348 ntBASIC3.72□□□□□ -1.81
SIX3O95343 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SIX3O95343 AC231657.1-201ENST00000624313 397 ntBASIC3.72□□□□□ -1.81
SIX3O95343 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX3O95343 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SIX3O95343 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX3O95343 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX3O95343 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SIX3O95343 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SIX3O95343 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.71□□□□□ -1.81
SIX3O95343 AP002907.1-201ENST00000606361 1430 ntBASIC3.71□□□□□ -1.82
SIX3O95343 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX3O95343 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SIX3O95343 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SIX3O95343 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SIX3O95343 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SIX3O95343 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.71□□□□□ -1.82
SIX3O95343 RNU6-1074P-201ENST00000383995 104 ntBASIC3.71□□□□□ -1.82
SIX3O95343 MIR7-3-201ENST00000384898 110 ntBASIC3.71□□□□□ -1.82
SIX3O95343 U3.29-201ENST00000391296 212 ntBASIC3.71□□□□□ -1.82
SIX3O95343 RNA5SP80-201ENST00000410475 111 ntBASIC3.71□□□□□ -1.82
SIX3O95343 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms