Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB3O75112 AL139415.2-201ENST00000431968 163 ntBASIC3.88□□□□□ -1.79
LDB3O75112 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB3O75112 RPS26P56-201ENST00000444468 240 ntBASIC3.88□□□□□ -1.79
LDB3O75112 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB3O75112 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB3O75112 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB3O75112 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.88□□□□□ -1.79
LDB3O75112 RPL18AP17-201ENST00000455326 198 ntBASIC3.88□□□□□ -1.79
LDB3O75112 RPL37P6-202ENST00000464216 403 ntBASIC3.88□□□□□ -1.79
LDB3O75112 RPL30P9-201ENST00000465586 330 ntBASIC3.88□□□□□ -1.79
LDB3O75112 RN7SL385P-201ENST00000468873 276 ntBASIC3.88□□□□□ -1.79
LDB3O75112 AC010301.1-201ENST00000473936 355 ntBASIC3.88□□□□□ -1.79
LDB3O75112 RN7SL604P-201ENST00000492589 296 ntBASIC3.88□□□□□ -1.79
LDB3O75112 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.88□□□□□ -1.79
LDB3O75112 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.88□□□□□ -1.79
LDB3O75112 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB3O75112 RNY4P37-201ENST00000516225 96 ntBASIC3.88□□□□□ -1.79
LDB3O75112 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB3O75112 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB3O75112 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.88□□□□□ -1.79
LDB3O75112 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB3O75112 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.88□□□□□ -1.79
LDB3O75112 AC025884.1-201ENST00000556034 378 ntBASIC3.88□□□□□ -1.79
LDB3O75112 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB3O75112 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.88□□□□□ -1.79
LDB3O75112 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.88□□□□□ -1.79
LDB3O75112 RPL23AP87-202ENST00000573039 466 ntBASIC3.88□□□□□ -1.79
LDB3O75112 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB3O75112 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.88□□□□□ -1.79
LDB3O75112 MIR548AB-201ENST00000584917 84 ntBASIC3.88□□□□□ -1.79
LDB3O75112 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB3O75112 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.88□□□□□ -1.79
LDB3O75112 AP001596.2-201ENST00000608410 312 ntBASIC3.88□□□□□ -1.79
LDB3O75112 U6atac.1-201ENST00000616025 117 ntBASIC3.88□□□□□ -1.79
LDB3O75112 SNX18P1Y-201ENST00000616231 511 ntBASIC3.88□□□□□ -1.79
LDB3O75112 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LDB3O75112 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.88□□□□□ -1.79
LDB3O75112 ZNF33CP-201ENST00000432492 2030 ntBASIC3.88□□□□□ -1.79
LDB3O75112 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.88□□□□□ -1.79
LDB3O75112 MTND5P28-201ENST00000438005 1594 ntBASIC3.88□□□□□ -1.79
LDB3O75112 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.88□□□□□ -1.79
LDB3O75112 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LDB3O75112 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LDB3O75112 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.88□□□□□ -1.79
LDB3O75112 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
LDB3O75112 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LDB3O75112 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
LDB3O75112 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.87□□□□□ -1.79
LDB3O75112 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.87□□□□□ -1.79
LDB3O75112 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LDB3O75112 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
LDB3O75112 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
LDB3O75112 OR4A15-201ENST00000314706 1035 ntBASIC3.87□□□□□ -1.79
LDB3O75112 OR11H4-201ENST00000315409 1082 ntBASIC3.87□□□□□ -1.79
LDB3O75112 Y_RNA.18-201ENST00000362461 102 ntBASIC3.87□□□□□ -1.79
LDB3O75112 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
LDB3O75112 RNU6-348P-201ENST00000384386 107 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AC073264.1-201ENST00000411508 416 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AC007899.1-201ENST00000412776 775 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AC108032.1-201ENST00000416706 207 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.87□□□□□ -1.79
LDB3O75112 FNDC3CP-201ENST00000420795 1155 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.87□□□□□ -1.79
LDB3O75112 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB3O75112 RSL24D1P6-201ENST00000426934 401 ntBASIC3.87□□□□□ -1.79
LDB3O75112 OR4F13P-201ENST00000428478 931 ntBASIC3.87□□□□□ -1.79
LDB3O75112 OR2B8P-201ENST00000432841 938 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AL596276.1-201ENST00000434465 418 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.87□□□□□ -1.79
LDB3O75112 MTND1P28-201ENST00000435623 950 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.87□□□□□ -1.79
LDB3O75112 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.87□□□□□ -1.79
LDB3O75112 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.87□□□□□ -1.79
LDB3O75112 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB3O75112 MTCO1P48-201ENST00000448024 1096 ntBASIC3.87□□□□□ -1.79
LDB3O75112 RAD23BP3-201ENST00000454157 1152 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB3O75112 SUMO2P2-201ENST00000456482 255 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB3O75112 ARPC3P2-201ENST00000457786 533 ntBASIC3.87□□□□□ -1.79
LDB3O75112 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LDB3O75112 RPL7P19-201ENST00000469948 618 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AC087385.1-201ENST00000475062 312 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.87□□□□□ -1.79
LDB3O75112 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.87□□□□□ -1.79
LDB3O75112 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.87□□□□□ -1.79
LDB3O75112 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.87□□□□□ -1.79
LDB3O75112 OR4A12P-201ENST00000530847 918 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB3O75112 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB3O75112 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB3O75112 SULT1C2P1-202ENST00000562418 459 ntBASIC3.87□□□□□ -1.79
LDB3O75112 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB3O75112 AC087481.2-201ENST00000565492 330 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.87□□□□□ -1.79
LDB3O75112 AP001180.3-201ENST00000582221 145 ntBASIC3.87□□□□□ -1.79
LDB3O75112 SNORD39.3-201ENST00000584451 71 ntBASIC3.87□□□□□ -1.79
LDB3O75112 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms