Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 CYP4F35P-202ENST00000636121 390 ntBASIC4.98□□□□□ -1.61
TRIM13O60858 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM13O60858 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TRIM13O60858 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM13O60858 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
TRIM13O60858 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM13O60858 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM13O60858 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM13O60858 OR4G1P-203ENST00000641984 1631 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM13O60858 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM13O60858 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.97□□□□□ -1.61
TRIM13O60858 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM13O60858 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM13O60858 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TRIM13O60858 UBBP2-201ENST00000376781 231 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 AC117470.1-201ENST00000381974 330 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 DEFB109C-201ENST00000382575 264 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 DEFB109B-201ENST00000382656 264 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 RNU6-1026P-201ENST00000384465 108 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM13O60858 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 MTATP6P29-201ENST00000415057 132 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM13O60858 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM13O60858 AL451054.2-201ENST00000420896 202 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM13O60858 AC005517.2-201ENST00000424673 553 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM13O60858 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM13O60858 BNIP3P2-201ENST00000441221 577 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 RPL32P28-201ENST00000443577 397 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 Z92846.1-201ENST00000456203 268 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 AC097493.1-201ENST00000463958 372 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 VN1R17P-201ENST00000472048 1090 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 AC012181.1-201ENST00000479895 423 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 HMGB1P30-201ENST00000492455 606 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 AC108693.1-201ENST00000496068 432 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM13O60858 EIF4EP3-201ENST00000498782 656 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 NPM1P41-201ENST00000512920 831 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM13O60858 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM13O60858 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM13O60858 AC023442.1-201ENST00000531247 422 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM13O60858 AC093519.1-201ENST00000566109 298 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 MIR4675-201ENST00000577898 77 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM13O60858 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM13O60858 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM13O60858 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM13O60858 AL133216.2-202ENST00000634512 349 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM13O60858 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TRIM13O60858 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM13O60858 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM13O60858 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
TRIM13O60858 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
TRIM13O60858 AC235565.1-201ENST00000456962 1325 ntBASIC4.97□□□□□ -1.61
TRIM13O60858 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TRIM13O60858 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TRIM13O60858 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.96□□□□□ -1.61
TRIM13O60858 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.96□□□□□ -1.61
TRIM13O60858 ERCC6-202ENST00000374127 1782 ntBASIC4.96□□□□□ -1.61
TRIM13O60858 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
TRIM13O60858 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
TRIM13O60858 AC107068.1-201ENST00000563286 4218 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRIM13O60858 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM13O60858 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM13O60858 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRIM13O60858 RNU6-1151P-201ENST00000384684 107 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 MIR600-201ENST00000385007 98 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRIM13O60858 RPL23AP32-201ENST00000395315 459 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 RPS20P2-201ENST00000402520 389 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM13O60858 AC234782.4-201ENST00000417646 1048 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 AC092634.6-201ENST00000418558 192 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM13O60858 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
TRIM13O60858 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM13O60858 CYCSP6-201ENST00000434498 302 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 CYCSP12-201ENST00000437729 300 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 AL450023.3-201ENST00000440592 271 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 AL049734.2-201ENST00000441066 616 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 AL136380.1-201ENST00000447970 162 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 RPS24P6-201ENST00000452670 400 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 RPL37P3-201ENST00000456825 293 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 MTATP8P1-201ENST00000467115 207 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM13O60858 AC078785.3-201ENST00000476607 425 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 RN7SL649P-201ENST00000496974 275 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM13O60858 SMURF2P1-201ENST00000514992 481 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 RN7SKP46-201ENST00000515942 234 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 RN7SKP40-201ENST00000517211 242 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms