Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 BNIP3P11-201ENST00000603878 563 ntBASIC3.59□□□□□ -1.83
SNX3O60493 AL592221.1-201ENST00000605266 382 ntBASIC3.59□□□□□ -1.83
SNX3O60493 Z99289.3-201ENST00000605586 594 ntBASIC3.59□□□□□ -1.83
SNX3O60493 AC231657.1-201ENST00000624313 397 ntBASIC3.59□□□□□ -1.83
SNX3O60493 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SNX3O60493 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SNX3O60493 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SNX3O60493 ZNF826P-207ENST00000622273 1910 ntBASIC3.58□□□□□ -1.84
SNX3O60493 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SNX3O60493 SNORA58B-201ENST00000364259 136 ntBASIC3.58□□□□□ -1.84
SNX3O60493 U3.29-201ENST00000391296 212 ntBASIC3.58□□□□□ -1.84
SNX3O60493 U3.39-201ENST00000408569 239 ntBASIC3.58□□□□□ -1.84
SNX3O60493 RNA5SP107-201ENST00000411358 122 ntBASIC3.58□□□□□ -1.84
SNX3O60493 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.58□□□□□ -1.84
SNX3O60493 AC093578.1-201ENST00000415219 368 ntBASIC3.58□□□□□ -1.84
SNX3O60493 AC005005.2-201ENST00000420779 380 ntBASIC3.58□□□□□ -1.84
SNX3O60493 AC012065.2-201ENST00000421295 375 ntBASIC3.58□□□□□ -1.84
SNX3O60493 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.58□□□□□ -1.84
SNX3O60493 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SNX3O60493 MRPS18BP2-201ENST00000434310 759 ntBASIC3.58□□□□□ -1.84
SNX3O60493 RPL23AP74-201ENST00000437246 471 ntBASIC3.58□□□□□ -1.84
SNX3O60493 CBX1P1-201ENST00000440184 427 ntBASIC3.58□□□□□ -1.84
SNX3O60493 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.58□□□□□ -1.84
SNX3O60493 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.58□□□□□ -1.84
SNX3O60493 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.58□□□□□ -1.84
SNX3O60493 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.58□□□□□ -1.84
SNX3O60493 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SNX3O60493 RN7SL610P-201ENST00000463845 291 ntBASIC3.58□□□□□ -1.84
SNX3O60493 SYPL1P1-201ENST00000473622 768 ntBASIC3.58□□□□□ -1.84
SNX3O60493 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
SNX3O60493 NCOR1P1-202ENST00000486162 291 ntBASIC3.58□□□□□ -1.84
SNX3O60493 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.58□□□□□ -1.84
SNX3O60493 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.58□□□□□ -1.84
SNX3O60493 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.58□□□□□ -1.84
SNX3O60493 AC118282.1-201ENST00000506408 765 ntBASIC3.58□□□□□ -1.84
SNX3O60493 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.58□□□□□ -1.84
SNX3O60493 RNA5SP164-201ENST00000516533 110 ntBASIC3.58□□□□□ -1.84
SNX3O60493 RNU6-579P-201ENST00000516879 102 ntBASIC3.58□□□□□ -1.84
SNX3O60493 AC105185.1-201ENST00000518705 535 ntBASIC3.58□□□□□ -1.84
SNX3O60493 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.58□□□□□ -1.84
SNX3O60493 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.58□□□□□ -1.84
SNX3O60493 DEFB131D-201ENST00000526803 184 ntBASIC3.58□□□□□ -1.84
SNX3O60493 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.58□□□□□ -1.84
SNX3O60493 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.58□□□□□ -1.84
SNX3O60493 AC026333.2-201ENST00000542164 106 ntBASIC3.58□□□□□ -1.84
SNX3O60493 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.58□□□□□ -1.84
SNX3O60493 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.58□□□□□ -1.84
SNX3O60493 AC023161.2-201ENST00000551218 780 ntBASIC3.58□□□□□ -1.84
SNX3O60493 DUXAP6-201ENST00000553858 601 ntBASIC3.58□□□□□ -1.84
SNX3O60493 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.58□□□□□ -1.84
SNX3O60493 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.58□□□□□ -1.84
SNX3O60493 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.58□□□□□ -1.84
SNX3O60493 AL031281.1-201ENST00000604049 488 ntBASIC3.58□□□□□ -1.84
SNX3O60493 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.58□□□□□ -1.84
SNX3O60493 IGHV3-29-201ENST00000604817 344 ntBASIC3.58□□□□□ -1.84
SNX3O60493 AC006329.2-201ENST00000611491 394 ntBASIC3.58□□□□□ -1.84
SNX3O60493 AC110801.1-201ENST00000623590 212 ntBASIC3.58□□□□□ -1.84
SNX3O60493 AC040168.1-201ENST00000623594 991 ntBASIC3.58□□□□□ -1.84
SNX3O60493 AP001784.1-201ENST00000624107 428 ntBASIC3.58□□□□□ -1.84
SNX3O60493 MTND2P41-201ENST00000637599 773 ntBASIC3.58□□□□□ -1.84
SNX3O60493 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.58□□□□□ -1.84
SNX3O60493 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.58□□□□□ -1.84
SNX3O60493 MTND4P34-201ENST00000572715 1371 ntBASIC3.58□□□□□ -1.84
SNX3O60493 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.58□□□□□ -1.84
SNX3O60493 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SNX3O60493 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SNX3O60493 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.58□□□□□ -1.84
SNX3O60493 MFSD8-236ENST00000641509 4050 ntBASIC3.57□□□□□ -1.84
SNX3O60493 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.57□□□□□ -1.84
SNX3O60493 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SNX3O60493 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SNX3O60493 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SNX3O60493 RN7SKP44-201ENST00000363602 316 ntBASIC3.57□□□□□ -1.84
SNX3O60493 RNVU1-6-201ENST00000364688 164 ntBASIC3.57□□□□□ -1.84
SNX3O60493 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SNX3O60493 TAS2R15P-201ENST00000390674 928 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.57□□□□□ -1.84
SNX3O60493 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.57□□□□□ -1.84
SNX3O60493 USP9YP33-201ENST00000412220 421 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AC126124.2-201ENST00000413542 321 ntBASIC3.57□□□□□ -1.84
SNX3O60493 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.57□□□□□ -1.84
SNX3O60493 AC244098.2-201ENST00000422068 99 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AL049610.1-201ENST00000423374 372 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX3O60493 FAR2P4-202ENST00000425399 584 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AC006548.1-201ENST00000427470 102 ntBASIC3.57□□□□□ -1.84
SNX3O60493 PSMA6P3-201ENST00000428242 164 ntBASIC3.57□□□□□ -1.84
SNX3O60493 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SNX3O60493 USP9YP35-201ENST00000435696 412 ntBASIC3.57□□□□□ -1.84
SNX3O60493 MTND4P6-201ENST00000438297 472 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.57□□□□□ -1.84
SNX3O60493 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX3O60493 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.57□□□□□ -1.84
SNX3O60493 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.57□□□□□ -1.84
SNX3O60493 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX3O60493 RPS20P32-201ENST00000456044 356 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.57□□□□□ -1.84
SNX3O60493 AC097493.1-201ENST00000463958 372 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AC114981.1-201ENST00000503897 678 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms