Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 UBE2V1P12-201ENST00000503954 474 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.38□□□□□ -1.87
LCMT2O60294 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.38□□□□□ -1.87
LCMT2O60294 RNA5SP135-201ENST00000517019 125 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 SCARNA1-201ENST00000517138 166 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.38□□□□□ -1.87
LCMT2O60294 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.38□□□□□ -1.87
LCMT2O60294 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.38□□□□□ -1.87
LCMT2O60294 AC026333.2-201ENST00000542164 106 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.38□□□□□ -1.87
LCMT2O60294 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.38□□□□□ -1.87
LCMT2O60294 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.38□□□□□ -1.87
LCMT2O60294 MIR4738-201ENST00000579134 87 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 MIR5708-201ENST00000579723 85 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.38□□□□□ -1.87
LCMT2O60294 BNIP3P40-201ENST00000596017 556 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 AL160237.3-201ENST00000604114 1013 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 AC245389.1-201ENST00000605141 529 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 AL158163.2-201ENST00000619110 700 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 AC092628.2-201ENST00000622492 339 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 AC092184.1-201ENST00000625042 715 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 OR4G3P-201ENST00000633500 913 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.38□□□□□ -1.87
LCMT2O60294 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LCMT2O60294 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
LCMT2O60294 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LCMT2O60294 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LCMT2O60294 AC068647.1-201ENST00000489539 2265 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
LCMT2O60294 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
LCMT2O60294 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LCMT2O60294 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.37□□□□□ -1.87
LCMT2O60294 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LCMT2O60294 AL365440.1-201ENST00000436135 2167 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
LCMT2O60294 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LCMT2O60294 RNU6-761P-201ENST00000384148 107 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 MIR184-201ENST00000384962 84 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 RN7SKP285-201ENST00000410137 318 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 FCF1P2-201ENST00000415284 583 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.37□□□□□ -1.87
LCMT2O60294 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.37□□□□□ -1.87
LCMT2O60294 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.37□□□□□ -1.87
LCMT2O60294 CYCSP4-201ENST00000429682 331 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 MRPS18BP2-201ENST00000434310 759 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 AL358794.1-201ENST00000445689 381 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 RPL7P52-201ENST00000449200 742 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 AC091564.1-201ENST00000464563 479 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 AL136126.1-201ENST00000473603 402 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 OR5H5P-201ENST00000503164 928 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.37□□□□□ -1.87
LCMT2O60294 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.37□□□□□ -1.87
LCMT2O60294 RNU2-27P-201ENST00000516185 142 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 SNORA31.20-201ENST00000517111 133 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.37□□□□□ -1.87
LCMT2O60294 AP000790.1-201ENST00000528891 737 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 OR5B10P-201ENST00000532869 642 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.37□□□□□ -1.87
LCMT2O60294 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.37□□□□□ -1.87
LCMT2O60294 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.37□□□□□ -1.87
LCMT2O60294 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.37□□□□□ -1.87
LCMT2O60294 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.37□□□□□ -1.87
LCMT2O60294 AL389895.1-201ENST00000554127 252 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.37□□□□□ -1.87
LCMT2O60294 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.37□□□□□ -1.87
LCMT2O60294 AC012182.1-201ENST00000570133 895 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 AC103881.1-201ENST00000603476 538 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 DPRXP5-201ENST00000604662 539 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LCMT2O60294 PART1_2.1-201ENST00000612397 250 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 AP003355.3-201ENST00000623465 114 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 AC006963.1-201ENST00000624003 1052 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.37□□□□□ -1.87
LCMT2O60294 AC087821.2-201ENST00000637086 450 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.37□□□□□ -1.87
LCMT2O60294 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LCMT2O60294 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LCMT2O60294 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LCMT2O60294 CEP170P1-201ENST00000502249 4587 ntBASIC3.37□□□□□ -1.87
LCMT2O60294 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LCMT2O60294 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.37□□□□□ -1.87
LCMT2O60294 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.36□□□□□ -1.87
LCMT2O60294 AL161912.2-201ENST00000565707 3007 ntBASIC3.36□□□□□ -1.87
LCMT2O60294 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
LCMT2O60294 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LCMT2O60294 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LCMT2O60294 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LCMT2O60294 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.36□□□□□ -1.87
LCMT2O60294 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LCMT2O60294 RNU6-989P-201ENST00000362756 107 ntBASIC3.36□□□□□ -1.87
LCMT2O60294 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
LCMT2O60294 Y_RNA.472-201ENST00000384322 102 ntBASIC3.36□□□□□ -1.87
LCMT2O60294 MIR200C-201ENST00000384980 68 ntBASIC3.36□□□□□ -1.87
LCMT2O60294 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LCMT2O60294 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.36□□□□□ -1.87
LCMT2O60294 RNA5SP129-201ENST00000410276 118 ntBASIC3.36□□□□□ -1.87
LCMT2O60294 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.36□□□□□ -1.87
LCMT2O60294 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.36□□□□□ -1.87
LCMT2O60294 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LCMT2O60294 AL049610.1-201ENST00000423374 372 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms