Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC007566.2-201ENST00000603642 413 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 AC006023.2-201ENST00000609916 167 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 AC018816.2-201ENST00000621460 353 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.36□□□□□ -1.87
CHMP2AO43633 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.36□□□□□ -1.87
CHMP2AO43633 AC139713.2-210ENST00000641741 992 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHMP2AO43633 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHMP2AO43633 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHMP2AO43633 MAPK10-362ENST00000641864 4484 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CHMP2AO43633 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.35□□□□□ -1.87
CHMP2AO43633 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CHMP2AO43633 RNA5SP295-201ENST00000362655 121 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 U3.6-201ENST00000363622 211 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 RNU6-374P-201ENST00000364146 108 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CHMP2AO43633 NDUFB4P4-201ENST00000404822 243 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP2AO43633 GTF2IP23-201ENST00000423746 351 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 HIGD1AP11-201ENST00000438361 280 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 AC068135.1-201ENST00000446164 246 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 AC233982.1-201ENST00000451247 436 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 MTND3P4-201ENST00000453537 303 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 ARPC3P2-201ENST00000457786 533 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 RPS29P26-201ENST00000477483 171 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP2AO43633 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP2AO43633 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP2AO43633 SNORA48.9-201ENST00000516419 162 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 AC113192.3-201ENST00000529152 742 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 AC109635.4-202ENST00000531666 412 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.35□□□□□ -1.87
CHMP2AO43633 AC067805.1-201ENST00000559344 470 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 AC012414.2-201ENST00000559474 187 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP2AO43633 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP2AO43633 MTCYBP28-201ENST00000566728 1132 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 MTCO3P24-201ENST00000572729 782 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 AC006386.2-201ENST00000624491 75 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 AC012005.1-201ENST00000624575 75 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 AL137790.1-201ENST00000634283 177 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP2AO43633 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CHMP2AO43633 AC010733.2-201ENST00000589496 5702 ntBASIC3.35□□□□□ -1.87
CHMP2AO43633 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.35□□□□□ -1.87
CHMP2AO43633 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP2AO43633 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.35□□□□□ -1.87
CHMP2AO43633 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CHMP2AO43633 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHMP2AO43633 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.34□□□□□ -1.87
CHMP2AO43633 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CHMP2AO43633 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHMP2AO43633 MIR1250-201ENST00000408098 113 ntBASIC3.34□□□□□ -1.87
CHMP2AO43633 AC091390.3-201ENST00000426478 338 ntBASIC3.34□□□□□ -1.87
CHMP2AO43633 TRIAP1P1-201ENST00000427062 225 ntBASIC3.34□□□□□ -1.87
CHMP2AO43633 UBE2V1P5-201ENST00000440070 405 ntBASIC3.34□□□□□ -1.87
CHMP2AO43633 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.34□□□□□ -1.87
CHMP2AO43633 XKRY2-201ENST00000442362 1093 ntBASIC3.34□□□□□ -1.87
CHMP2AO43633 AC112492.1-201ENST00000449607 712 ntBASIC3.34□□□□□ -1.87
CHMP2AO43633 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.34□□□□□ -1.87
CHMP2AO43633 OR9N1P-202ENST00000494289 481 ntBASIC3.34□□□□□ -1.87
CHMP2AO43633 HMGB1P22-201ENST00000505315 124 ntBASIC3.34□□□□□ -1.87
CHMP2AO43633 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.34□□□□□ -1.87
CHMP2AO43633 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.34□□□□□ -1.87
CHMP2AO43633 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.34□□□□□ -1.87
CHMP2AO43633 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.34□□□□□ -1.87
CHMP2AO43633 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.34□□□□□ -1.87
CHMP2AO43633 AC011471.1-201ENST00000585766 187 ntBASIC3.34□□□□□ -1.87
CHMP2AO43633 AC015871.2-201ENST00000603605 948 ntBASIC3.34□□□□□ -1.87
CHMP2AO43633 AC079791.1-201ENST00000605356 973 ntBASIC3.34□□□□□ -1.87
CHMP2AO43633 AC135507.2-201ENST00000612443 309 ntBASIC3.34□□□□□ -1.87
CHMP2AO43633 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CHMP2AO43633 MTND5P28-201ENST00000438005 1594 ntBASIC3.34□□□□□ -1.88
CHMP2AO43633 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.33□□□□□ -1.88
CHMP2AO43633 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHMP2AO43633 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.33□□□□□ -1.88
CHMP2AO43633 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.33□□□□□ -1.88
CHMP2AO43633 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHMP2AO43633 RNA5SP129-201ENST00000410276 118 ntBASIC3.33□□□□□ -1.88
CHMP2AO43633 RNA5SP274-201ENST00000410484 108 ntBASIC3.33□□□□□ -1.88
CHMP2AO43633 RNU4-78P-201ENST00000410940 126 ntBASIC3.33□□□□□ -1.88
CHMP2AO43633 RPL7P8-201ENST00000411964 730 ntBASIC3.33□□□□□ -1.88
CHMP2AO43633 EEF1A1P41-201ENST00000414667 207 ntBASIC3.33□□□□□ -1.88
CHMP2AO43633 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.33□□□□□ -1.88
CHMP2AO43633 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.33□□□□□ -1.88
CHMP2AO43633 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.33□□□□□ -1.88
CHMP2AO43633 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.33□□□□□ -1.88
CHMP2AO43633 AC092685.1-201ENST00000447960 1243 ntBASIC3.33□□□□□ -1.88
CHMP2AO43633 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.33□□□□□ -1.88
CHMP2AO43633 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.33□□□□□ -1.88
CHMP2AO43633 SCGB1D5P-201ENST00000515134 247 ntBASIC3.33□□□□□ -1.88
CHMP2AO43633 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.33□□□□□ -1.88
CHMP2AO43633 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.33□□□□□ -1.88
CHMP2AO43633 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.33□□□□□ -1.88
CHMP2AO43633 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.33□□□□□ -1.88
CHMP2AO43633 AC011492.1-201ENST00000600023 315 ntBASIC3.33□□□□□ -1.88
CHMP2AO43633 AF131215.7-201ENST00000602443 707 ntBASIC3.33□□□□□ -1.88
CHMP2AO43633 AC091488.1-201ENST00000604239 660 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms