Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PAX4O43316 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.6□□□□□ -1.67
PAX4O43316 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PAX4O43316 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.6□□□□□ -1.67
PAX4O43316 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.6□□□□□ -1.67
PAX4O43316 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PAX4O43316 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
PAX4O43316 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PAX4O43316 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PAX4O43316 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
PAX4O43316 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PAX4O43316 RNU6-834P-201ENST00000362367 110 ntBASIC4.6□□□□□ -1.67
PAX4O43316 RNU1-5P-201ENST00000362684 144 ntBASIC4.6□□□□□ -1.67
PAX4O43316 Y_RNA.369-201ENST00000365568 117 ntBASIC4.6□□□□□ -1.67
PAX4O43316 RNU6-1151P-201ENST00000384684 107 ntBASIC4.6□□□□□ -1.67
PAX4O43316 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PAX4O43316 RNU4-64P-201ENST00000410795 131 ntBASIC4.6□□□□□ -1.67
PAX4O43316 RPL23AP69-201ENST00000431134 458 ntBASIC4.6□□□□□ -1.67
PAX4O43316 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.6□□□□□ -1.67
PAX4O43316 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.6□□□□□ -1.67
PAX4O43316 RNU7-167P-201ENST00000459160 62 ntBASIC4.6□□□□□ -1.67
PAX4O43316 AC010326.1-201ENST00000462726 602 ntBASIC4.6□□□□□ -1.67
PAX4O43316 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.6□□□□□ -1.67
PAX4O43316 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.6□□□□□ -1.67
PAX4O43316 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.6□□□□□ -1.67
PAX4O43316 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.6□□□□□ -1.67
PAX4O43316 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.6□□□□□ -1.67
PAX4O43316 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.6□□□□□ -1.67
PAX4O43316 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC4.6□□□□□ -1.67
PAX4O43316 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.6□□□□□ -1.67
PAX4O43316 AL121576.1-201ENST00000556055 276 ntBASIC4.6□□□□□ -1.67
PAX4O43316 H3F3AP1-201ENST00000559984 334 ntBASIC4.6□□□□□ -1.67
PAX4O43316 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC4.6□□□□□ -1.67
PAX4O43316 FAM60BP-201ENST00000578364 658 ntBASIC4.6□□□□□ -1.67
PAX4O43316 RN7SL66P-201ENST00000582099 264 ntBASIC4.6□□□□□ -1.67
PAX4O43316 FAM106CP-201ENST00000582212 507 ntBASIC4.6□□□□□ -1.67
PAX4O43316 MIR4282-201ENST00000583613 67 ntBASIC4.6□□□□□ -1.67
PAX4O43316 AC090525.3-201ENST00000605601 189 ntBASIC4.6□□□□□ -1.67
PAX4O43316 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.6□□□□□ -1.67
PAX4O43316 AC243654.2-201ENST00000612843 443 ntBASIC4.6□□□□□ -1.67
PAX4O43316 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.6□□□□□ -1.67
PAX4O43316 MIR6085-201ENST00000618314 110 ntBASIC4.6□□□□□ -1.67
PAX4O43316 AC068213.1-201ENST00000625124 226 ntBASIC4.6□□□□□ -1.67
PAX4O43316 AC129915.3-201ENST00000634128 948 ntBASIC4.6□□□□□ -1.67
PAX4O43316 U6.92-201ENST00000636464 89 ntBASIC4.6□□□□□ -1.67
PAX4O43316 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PAX4O43316 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PAX4O43316 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC4.6□□□□□ -1.67
PAX4O43316 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PAX4O43316 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PAX4O43316 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.6□□□□□ -1.67
PAX4O43316 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PAX4O43316 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
PAX4O43316 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC4.6□□□□□ -1.67
PAX4O43316 AL136360.1-201ENST00000503377 1900 ntBASIC4.6□□□□□ -1.67
PAX4O43316 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PAX4O43316 BDP1P-201ENST00000582658 1990 ntBASIC4.6□□□□□ -1.67
PAX4O43316 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.6□□□□□ -1.67
PAX4O43316 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
PAX4O43316 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PAX4O43316 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PAX4O43316 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
PAX4O43316 COG2-209ENST00000534989 2963 ntTSL 2 BASIC4.59□□□□□ -1.67
PAX4O43316 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
PAX4O43316 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PAX4O43316 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
PAX4O43316 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
PAX4O43316 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PAX4O43316 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PAX4O43316 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
PAX4O43316 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
PAX4O43316 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PAX4O43316 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.59□□□□□ -1.67
PAX4O43316 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PAX4O43316 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PAX4O43316 RN7SKP186-201ENST00000365371 303 ntBASIC4.59□□□□□ -1.67
PAX4O43316 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PAX4O43316 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PAX4O43316 U3.52-201ENST00000384034 216 ntBASIC4.59□□□□□ -1.67
PAX4O43316 Y_RNA.435-201ENST00000384095 112 ntBASIC4.59□□□□□ -1.67
PAX4O43316 RNU6-937P-201ENST00000384325 106 ntBASIC4.59□□□□□ -1.67
PAX4O43316 MIR19A-201ENST00000384878 82 ntBASIC4.59□□□□□ -1.67
PAX4O43316 RNY4P29-201ENST00000410801 97 ntBASIC4.59□□□□□ -1.67
PAX4O43316 RNU6-293P-201ENST00000411259 106 ntBASIC4.59□□□□□ -1.67
PAX4O43316 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.59□□□□□ -1.67
PAX4O43316 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC4.59□□□□□ -1.67
PAX4O43316 MTATP6P4-201ENST00000427725 675 ntBASIC4.59□□□□□ -1.67
PAX4O43316 TOMM20P4-201ENST00000427861 435 ntBASIC4.59□□□□□ -1.67
PAX4O43316 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PAX4O43316 AC000374.1-201ENST00000434698 1745 ntBASIC4.59□□□□□ -1.67
PAX4O43316 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC4.59□□□□□ -1.67
PAX4O43316 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.59□□□□□ -1.67
PAX4O43316 RPEP4-201ENST00000437636 602 ntBASIC4.59□□□□□ -1.67
PAX4O43316 OR7E116P-201ENST00000448529 957 ntBASIC4.59□□□□□ -1.67
PAX4O43316 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.59□□□□□ -1.67
PAX4O43316 RPL23AP12-201ENST00000467573 473 ntBASIC4.59□□□□□ -1.67
PAX4O43316 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PAX4O43316 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PAX4O43316 AC074250.1-201ENST00000511117 192 ntBASIC4.59□□□□□ -1.67
PAX4O43316 AC113155.1-201ENST00000511141 769 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms