Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 BNIP3P22-201ENST00000593399 556 ntBASIC3.62□□□□□ -1.83
CLDN3O15551 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.62□□□□□ -1.83
CLDN3O15551 GAS5-AS1-201ENST00000602767 694 ntBASIC3.62□□□□□ -1.83
CLDN3O15551 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN3O15551 AC012468.1-201ENST00000604888 430 ntBASIC3.62□□□□□ -1.83
CLDN3O15551 AC090425.2-201ENST00000608818 501 ntBASIC3.62□□□□□ -1.83
CLDN3O15551 AL590282.1-201ENST00000610379 1136 ntBASIC3.62□□□□□ -1.83
CLDN3O15551 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN3O15551 SNORD39.4-201ENST00000620099 78 ntBASIC3.62□□□□□ -1.83
CLDN3O15551 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.62□□□□□ -1.83
CLDN3O15551 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN3O15551 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
CLDN3O15551 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
CLDN3O15551 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN3O15551 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN3O15551 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN3O15551 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN3O15551 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN3O15551 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CLDN3O15551 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN3O15551 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CLDN3O15551 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN3O15551 RNU6-115P-201ENST00000364310 107 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CLDN3O15551 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN3O15551 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CLDN3O15551 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN3O15551 AL023807.1-201ENST00000407932 359 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 AC012065.2-201ENST00000421295 375 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN3O15551 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN3O15551 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN3O15551 ATP5C1P1-201ENST00000441945 895 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 AL592437.1-201ENST00000443781 492 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN3O15551 AL096829.2-201ENST00000446582 742 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN3O15551 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN3O15551 snoU13.22-201ENST00000459428 104 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN3O15551 OR5H5P-201ENST00000503164 928 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN3O15551 AC110794.1-201ENST00000505816 425 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.61□□□□□ -1.83
CLDN3O15551 SNORA31.20-201ENST00000517111 133 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN3O15551 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN3O15551 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN3O15551 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN3O15551 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN3O15551 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN3O15551 MIR3186-201ENST00000577404 85 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.61□□□□□ -1.83
CLDN3O15551 SNORD39.3-201ENST00000584451 71 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN3O15551 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.61□□□□□ -1.83
CLDN3O15551 CKS1BP3-201ENST00000600888 237 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 AL031985.2-201ENST00000600955 480 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 AL355812.1-201ENST00000603215 216 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 AC006254.3-201ENST00000603353 884 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 AC073657.2-201ENST00000605661 303 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 AC096577.2-201ENST00000611455 153 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 AC092628.2-201ENST00000622492 339 ntBASIC3.61□□□□□ -1.83
CLDN3O15551 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN3O15551 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN3O15551 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN3O15551 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CLDN3O15551 RIOK3P1-201ENST00000418778 1528 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CLDN3O15551 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN3O15551 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN3O15551 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN3O15551 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CLDN3O15551 RNU6-989P-201ENST00000362756 107 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 SNORA70.4-201ENST00000365509 134 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN3O15551 RNU6-468P-201ENST00000384003 109 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN3O15551 AL512637.2-201ENST00000431287 1256 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN3O15551 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN3O15551 AL591503.2-201ENST00000442314 1005 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 AC004022.1-201ENST00000447766 1066 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN3O15551 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN3O15551 BTF3P5-201ENST00000457252 467 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 RN7SL807P-201ENST00000470923 297 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 AC021205.2-201ENST00000480069 347 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN3O15551 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 AP001636.2-201ENST00000525517 696 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN3O15551 HIGD1AP1-201ENST00000550979 275 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN3O15551 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN3O15551 AC012182.1-201ENST00000570133 895 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN3O15551 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN3O15551 uc_338.1-201ENST00000612113 180 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 AC073968.1-201ENST00000618594 637 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms