Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 C2orf27A-204ENST00000623058 969 ntBASIC3.48□□□□□ -1.85
MSH4O15457 AL353743.1-202ENST00000431724 1695 ntBASIC3.48□□□□□ -1.85
MSH4O15457 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
MSH4O15457 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
MSH4O15457 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
MSH4O15457 ZNF833P-201ENST00000424938 1494 ntBASIC3.47□□□□□ -1.85
MSH4O15457 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
MSH4O15457 MTND5P3-201ENST00000438536 1800 ntBASIC3.47□□□□□ -1.85
MSH4O15457 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
MSH4O15457 MIR422A-201ENST00000362286 90 ntBASIC3.47□□□□□ -1.85
MSH4O15457 SNORA63.3-201ENST00000362682 132 ntBASIC3.47□□□□□ -1.85
MSH4O15457 RNU6-444P-201ENST00000383988 108 ntBASIC3.47□□□□□ -1.85
MSH4O15457 MIR128-1-201ENST00000384921 82 ntBASIC3.47□□□□□ -1.85
MSH4O15457 SNORA48.5-201ENST00000391143 135 ntBASIC3.47□□□□□ -1.85
MSH4O15457 RN7SKP220-201ENST00000410611 288 ntBASIC3.47□□□□□ -1.85
MSH4O15457 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.47□□□□□ -1.85
MSH4O15457 UBE2V1P6-201ENST00000430840 422 ntBASIC3.47□□□□□ -1.85
MSH4O15457 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.47□□□□□ -1.85
MSH4O15457 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.47□□□□□ -1.85
MSH4O15457 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
MSH4O15457 RPS26P56-201ENST00000444468 240 ntBASIC3.47□□□□□ -1.85
MSH4O15457 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.47□□□□□ -1.85
MSH4O15457 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.47□□□□□ -1.85
MSH4O15457 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.47□□□□□ -1.85
MSH4O15457 ST13P14-201ENST00000474095 734 ntBASIC3.47□□□□□ -1.85
MSH4O15457 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.47□□□□□ -1.85
MSH4O15457 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
MSH4O15457 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.47□□□□□ -1.85
MSH4O15457 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.47□□□□□ -1.85
MSH4O15457 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.47□□□□□ -1.85
MSH4O15457 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.47□□□□□ -1.85
MSH4O15457 GTF2IP8-201ENST00000560687 584 ntBASIC3.47□□□□□ -1.85
MSH4O15457 MTCO1P40-201ENST00000574371 625 ntBASIC3.47□□□□□ -1.85
MSH4O15457 BPTFP1-201ENST00000579209 492 ntBASIC3.47□□□□□ -1.85
MSH4O15457 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.47□□□□□ -1.85
MSH4O15457 AC009948.4-201ENST00000604692 675 ntBASIC3.47□□□□□ -1.85
MSH4O15457 AC016542.1-201ENST00000608259 493 ntBASIC3.47□□□□□ -1.85
MSH4O15457 AP004247.3-201ENST00000608682 624 ntBASIC3.47□□□□□ -1.85
MSH4O15457 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.47□□□□□ -1.85
MSH4O15457 AC008121.2-201ENST00000614647 523 ntBASIC3.47□□□□□ -1.85
MSH4O15457 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.47□□□□□ -1.85
MSH4O15457 AC093875.1-201ENST00000623688 504 ntBASIC3.47□□□□□ -1.85
MSH4O15457 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.47□□□□□ -1.85
MSH4O15457 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MSH4O15457 ELL2P4-201ENST00000446870 1376 ntBASIC3.47□□□□□ -1.85
MSH4O15457 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
MSH4O15457 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
MSH4O15457 RNU6-468P-201ENST00000384003 109 ntBASIC3.46□□□□□ -1.86
MSH4O15457 AL355379.1-201ENST00000405542 640 ntBASIC3.46□□□□□ -1.86
MSH4O15457 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.46□□□□□ -1.86
MSH4O15457 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.46□□□□□ -1.86
MSH4O15457 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.46□□□□□ -1.86
MSH4O15457 AC091390.3-201ENST00000426478 338 ntBASIC3.46□□□□□ -1.86
MSH4O15457 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.46□□□□□ -1.86
MSH4O15457 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.46□□□□□ -1.86
MSH4O15457 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.46□□□□□ -1.86
MSH4O15457 AL590399.6-201ENST00000446396 307 ntBASIC3.46□□□□□ -1.86
MSH4O15457 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.46□□□□□ -1.86
MSH4O15457 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.46□□□□□ -1.86
MSH4O15457 RNU7-170P-201ENST00000459303 61 ntBASIC3.46□□□□□ -1.86
MSH4O15457 RNU7-140P-201ENST00000459546 60 ntBASIC3.46□□□□□ -1.86
MSH4O15457 NAP1L1P3-201ENST00000462291 880 ntBASIC3.46□□□□□ -1.86
MSH4O15457 RPL27AP5-201ENST00000469428 449 ntBASIC3.46□□□□□ -1.86
MSH4O15457 RPL21P18-201ENST00000469899 480 ntBASIC3.46□□□□□ -1.86
MSH4O15457 TMEM248P1-201ENST00000510579 951 ntBASIC3.46□□□□□ -1.86
MSH4O15457 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.46□□□□□ -1.86
MSH4O15457 RNU5A-7P-201ENST00000515979 116 ntBASIC3.46□□□□□ -1.86
MSH4O15457 IGKV2-23-201ENST00000518729 323 ntBASIC3.46□□□□□ -1.86
MSH4O15457 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.46□□□□□ -1.86
MSH4O15457 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.46□□□□□ -1.86
MSH4O15457 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.46□□□□□ -1.86
MSH4O15457 CR383656.14-201ENST00000551951 406 ntBASIC3.46□□□□□ -1.86
MSH4O15457 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.46□□□□□ -1.86
MSH4O15457 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.46□□□□□ -1.86
MSH4O15457 AC022069.1-201ENST00000582910 658 ntBASIC3.46□□□□□ -1.86
MSH4O15457 AL020997.3-201ENST00000602843 359 ntBASIC3.46□□□□□ -1.86
MSH4O15457 AC005000.2-201ENST00000605468 310 ntBASIC3.46□□□□□ -1.86
MSH4O15457 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.46□□□□□ -1.86
MSH4O15457 AC013468.1-201ENST00000608680 598 ntBASIC3.46□□□□□ -1.86
MSH4O15457 AC068880.4-201ENST00000623082 495 ntBASIC3.46□□□□□ -1.86
MSH4O15457 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.46□□□□□ -1.86
MSH4O15457 AC068620.4-201ENST00000636730 1182 ntBASIC3.46□□□□□ -1.86
MSH4O15457 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
MSH4O15457 AC073325.2-201ENST00000339545 159 ntBASIC3.45□□□□□ -1.86
MSH4O15457 MIR22-201ENST00000362190 85 ntBASIC3.45□□□□□ -1.86
MSH4O15457 RPL7P25-201ENST00000404151 721 ntBASIC3.45□□□□□ -1.86
MSH4O15457 AC069218.2-201ENST00000411665 344 ntBASIC3.45□□□□□ -1.86
MSH4O15457 OR51A3P-201ENST00000413596 924 ntBASIC3.45□□□□□ -1.86
MSH4O15457 TAF13P2-201ENST00000416876 286 ntBASIC3.45□□□□□ -1.86
MSH4O15457 AC245291.1-201ENST00000419501 328 ntBASIC3.45□□□□□ -1.86
MSH4O15457 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.45□□□□□ -1.86
MSH4O15457 AL050341.1-201ENST00000447743 313 ntBASIC3.45□□□□□ -1.86
MSH4O15457 RPS20P32-201ENST00000456044 356 ntBASIC3.45□□□□□ -1.86
MSH4O15457 HMGB3P30-201ENST00000457863 606 ntBASIC3.45□□□□□ -1.86
MSH4O15457 S100A11P2-201ENST00000467589 312 ntBASIC3.45□□□□□ -1.86
MSH4O15457 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.45□□□□□ -1.86
MSH4O15457 RN7SL20P-201ENST00000488827 297 ntBASIC3.45□□□□□ -1.86
MSH4O15457 OR4C2P-201ENST00000530855 1064 ntBASIC3.45□□□□□ -1.86
MSH4O15457 AC092451.2-201ENST00000538746 658 ntBASIC3.45□□□□□ -1.86
MSH4O15457 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms