Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC28A1O00337 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC28A1O00337 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SLC28A1O00337 AC007656.2-201ENST00000624902 4547 ntBASIC3.47□□□□□ -1.85
SLC28A1O00337 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SLC28A1O00337 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SLC28A1O00337 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SLC28A1O00337 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SLC28A1O00337 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC28A1O00337 RNU6-878P-201ENST00000384578 110 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 RPL32P23-201ENST00000397237 405 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.46□□□□□ -1.86
SLC28A1O00337 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SLC28A1O00337 AC068533.1-201ENST00000418542 415 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 PTP4A1P5-201ENST00000420305 455 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 CYCSP43-201ENST00000438233 310 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 AC092427.1-201ENST00000439177 601 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC28A1O00337 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC28A1O00337 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC28A1O00337 HMGN2P7-201ENST00000456186 273 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 RPS4XP13-201ENST00000483219 789 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 FCF1P3-201ENST00000496394 590 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC28A1O00337 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC28A1O00337 NDUFB4P9-201ENST00000511646 388 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC28A1O00337 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC28A1O00337 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.46□□□□□ -1.86
SLC28A1O00337 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC28A1O00337 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.46□□□□□ -1.86
SLC28A1O00337 HIGD1AP5-201ENST00000529959 259 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC28A1O00337 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.46□□□□□ -1.86
SLC28A1O00337 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC28A1O00337 ZNF192P1-203ENST00000565888 810 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC28A1O00337 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC28A1O00337 AC055876.5-201ENST00000605667 259 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC28A1O00337 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC28A1O00337 AL592295.2-201ENST00000612578 206 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 ZYXP1-201ENST00000617638 118 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 AC092650.2-201ENST00000619984 902 ntBASIC3.46□□□□□ -1.86
SLC28A1O00337 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC28A1O00337 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SLC28A1O00337 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
SLC28A1O00337 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC28A1O00337 AF127577.6-201ENST00000623352 2191 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC28A1O00337 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC28A1O00337 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC28A1O00337 SNRPEP3-201ENST00000338402 276 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 NACA3P-201ENST00000359690 648 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 SNORA70.2-201ENST00000364506 135 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 AC068538.1-201ENST00000376856 336 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 RNU6-413P-201ENST00000384115 107 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 MIR184-201ENST00000384962 84 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 AL450338.1-201ENST00000407987 512 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 RNU2-15P-201ENST00000410692 191 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 MTATP6P20-201ENST00000414147 562 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC28A1O00337 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC28A1O00337 GLRXP1-201ENST00000423261 334 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.45□□□□□ -1.86
SLC28A1O00337 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC28A1O00337 RPL23AP74-201ENST00000437246 471 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 HMGB1P12-201ENST00000438594 598 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC28A1O00337 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC28A1O00337 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC28A1O00337 RPL39P6-201ENST00000448289 150 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 SLC31A1P1-201ENST00000451221 567 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 BTF3P5-201ENST00000457252 467 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 snoU109.4-201ENST00000458953 143 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 HMGB1P25-201ENST00000468402 607 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 RN7SL385P-201ENST00000468873 276 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 SNRPGP3-201ENST00000469405 227 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 RPS15AP17-201ENST00000470598 390 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 AC023598.1-201ENST00000472521 361 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SLC28A1O00337 MTCO3P35-201ENST00000485582 781 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC28A1O00337 AC093853.1-201ENST00000515689 483 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 RN7SKP31-201ENST00000516354 278 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 RN7SKP289-201ENST00000517244 295 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC28A1O00337 AP006245.1-201ENST00000522549 120 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.45□□□□□ -1.86
SLC28A1O00337 AP000619.3-201ENST00000535634 1127 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 OR8R1P-201ENST00000543943 764 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 AC126177.3-201ENST00000551839 688 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.45□□□□□ -1.86
SLC28A1O00337 DUXAP6-201ENST00000553858 601 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC28A1O00337 HIGD1AP17-201ENST00000554576 276 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC28A1O00337 AC090912.3-201ENST00000609775 533 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 AC012531.5-201ENST00000611375 151 ntBASIC3.45□□□□□ -1.86
SLC28A1O00337 AC022149.2-201ENST00000621061 203 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms