Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RGPD3A6NKT7 RNU6-1159P-201ENST00000362933 107 ntBASIC3.18□□□□□ -1.9
RGPD3A6NKT7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RGPD3A6NKT7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RGPD3A6NKT7 MTCO3P31-201ENST00000405526 789 ntBASIC3.18□□□□□ -1.9
RGPD3A6NKT7 Y_RNA.595-201ENST00000410403 105 ntBASIC3.18□□□□□ -1.9
RGPD3A6NKT7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.18□□□□□ -1.9
RGPD3A6NKT7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.18□□□□□ -1.9
RGPD3A6NKT7 AC013410.1-201ENST00000436223 1232 ntBASIC3.18□□□□□ -1.9
RGPD3A6NKT7 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.18□□□□□ -1.9
RGPD3A6NKT7 DYNLL1P6-201ENST00000503440 264 ntBASIC3.18□□□□□ -1.9
RGPD3A6NKT7 AGGF1P8-201ENST00000562979 1000 ntBASIC3.18□□□□□ -1.9
RGPD3A6NKT7 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.18□□□□□ -1.9
RGPD3A6NKT7 CR381653.2-201ENST00000624041 768 ntBASIC3.18□□□□□ -1.9
RGPD3A6NKT7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RGPD3A6NKT7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RGPD3A6NKT7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RGPD3A6NKT7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RGPD3A6NKT7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.17□□□□□ -1.9
RGPD3A6NKT7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RGPD3A6NKT7 Y_RNA.118-201ENST00000363300 101 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RGPD3A6NKT7 AL121882.1-201ENST00000422893 417 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 VDAC1P3-201ENST00000434069 851 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 RN7SL499P-201ENST00000481141 276 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 RPL23AP70-201ENST00000483361 460 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 RNU6-964P-201ENST00000516524 69 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 AP001317.1-201ENST00000531194 960 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 OR5BN1P-201ENST00000532955 829 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 AC005046.1-201ENST00000608515 625 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 AP006248.2-201ENST00000623309 592 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 AL512643.1-201ENST00000635735 524 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RGPD3A6NKT7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.17□□□□□ -1.9
RGPD3A6NKT7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
RGPD3A6NKT7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RGPD3A6NKT7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.17□□□□□ -1.9
RGPD3A6NKT7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.17□□□□□ -1.9
RGPD3A6NKT7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.17□□□□□ -1.9
RGPD3A6NKT7 RPL36AP21-201ENST00000490372 323 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.17□□□□□ -1.9
RGPD3A6NKT7 AC010620.2-201ENST00000600135 313 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 MIR6845-201ENST00000613182 61 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 AC087565.3-202ENST00000642085 1603 ntBASIC3.17□□□□□ -1.9
RGPD3A6NKT7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RGPD3A6NKT7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RGPD3A6NKT7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
RGPD3A6NKT7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
RGPD3A6NKT7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RGPD3A6NKT7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RGPD3A6NKT7 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.16□□□□□ -1.9
RGPD3A6NKT7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.16□□□□□ -1.9
RGPD3A6NKT7 AL162388.1-201ENST00000450912 352 ntBASIC3.16□□□□□ -1.9
RGPD3A6NKT7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.16□□□□□ -1.9
RGPD3A6NKT7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.16□□□□□ -1.9
RGPD3A6NKT7 AL355836.1-201ENST00000555951 870 ntBASIC3.16□□□□□ -1.9
RGPD3A6NKT7 AL353997.5-201ENST00000618886 171 ntBASIC3.16□□□□□ -1.9
RGPD3A6NKT7 CRYM-AS1-204ENST00000637983 556 ntBASIC3.16□□□□□ -1.9
RGPD3A6NKT7 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.16□□□□□ -1.9
RGPD3A6NKT7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RGPD3A6NKT7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RGPD3A6NKT7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
RGPD3A6NKT7 CUL1P1-201ENST00000509510 2425 ntBASIC3.15□□□□□ -1.9
RGPD3A6NKT7 Y_RNA.796-201ENST00000364268 102 ntBASIC3.15□□□□□ -1.9
RGPD3A6NKT7 Y_RNA.799-201ENST00000364992 102 ntBASIC3.15□□□□□ -1.9
RGPD3A6NKT7 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
RGPD3A6NKT7 GSTA9P-201ENST00000406231 611 ntBASIC3.15□□□□□ -1.9
RGPD3A6NKT7 AC069218.2-201ENST00000411665 344 ntBASIC3.15□□□□□ -1.9
RGPD3A6NKT7 AC239798.3-201ENST00000454459 408 ntBASIC3.15□□□□□ -1.9
RGPD3A6NKT7 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.15□□□□□ -1.9
RGPD3A6NKT7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.15□□□□□ -1.9
RGPD3A6NKT7 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.15□□□□□ -1.9
RGPD3A6NKT7 AC074029.1-201ENST00000552531 1044 ntBASIC3.15□□□□□ -1.9
RGPD3A6NKT7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.15□□□□□ -1.9
RGPD3A6NKT7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.15□□□□□ -1.9
RGPD3A6NKT7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RGPD3A6NKT7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
RGPD3A6NKT7 PTP4A1P1-201ENST00000420539 515 ntBASIC3.15□□□□□ -1.91
RGPD3A6NKT7 ST13P20-201ENST00000447996 1065 ntBASIC3.15□□□□□ -1.91
RGPD3A6NKT7 TRBV1-201ENST00000476502 284 ntBASIC3.15□□□□□ -1.91
RGPD3A6NKT7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.15□□□□□ -1.91
RGPD3A6NKT7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.15□□□□□ -1.91
RGPD3A6NKT7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.15□□□□□ -1.91
RGPD3A6NKT7 AC090819.1-201ENST00000523800 1111 ntBASIC3.15□□□□□ -1.91
RGPD3A6NKT7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.15□□□□□ -1.91
RGPD3A6NKT7 MIR3186-201ENST00000577404 85 ntBASIC3.15□□□□□ -1.91
RGPD3A6NKT7 AC104237.2-201ENST00000612456 443 ntBASIC3.15□□□□□ -1.91
RGPD3A6NKT7 AL021368.2-201ENST00000606125 5352 ntBASIC3.14□□□□□ -1.91
RGPD3A6NKT7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RGPD3A6NKT7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RGPD3A6NKT7 AL356806.1-201ENST00000422524 916 ntBASIC3.14□□□□□ -1.91
RGPD3A6NKT7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RGPD3A6NKT7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.14□□□□□ -1.91
RGPD3A6NKT7 RN7SKP210-201ENST00000459176 261 ntBASIC3.14□□□□□ -1.91
RGPD3A6NKT7 RPL23AP42-201ENST00000471152 471 ntBASIC3.14□□□□□ -1.91
RGPD3A6NKT7 RPL23AP45-201ENST00000476406 468 ntBASIC3.14□□□□□ -1.91
RGPD3A6NKT7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.14□□□□□ -1.91
RGPD3A6NKT7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.14□□□□□ -1.91
RGPD3A6NKT7 OR8L1P-201ENST00000534005 955 ntBASIC3.14□□□□□ -1.91
RGPD3A6NKT7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms