Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 RNA5SP72-201ENST00000364442 117 ntBASIC1.7□□□□□ -2.14
LINC01549A6NIU2 RNU1-64P-201ENST00000365443 163 ntBASIC1.7□□□□□ -2.14
LINC01549A6NIU2 RNU4-52P-201ENST00000384209 138 ntBASIC1.7□□□□□ -2.14
LINC01549A6NIU2 MIR27B-201ENST00000385129 97 ntBASIC1.7□□□□□ -2.14
LINC01549A6NIU2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 AC026427.2-201ENST00000506228 536 ntBASIC1.7□□□□□ -2.14
LINC01549A6NIU2 RNU6-347P-201ENST00000516658 105 ntBASIC1.7□□□□□ -2.14
LINC01549A6NIU2 RNU1-40P-201ENST00000516816 164 ntBASIC1.7□□□□□ -2.14
LINC01549A6NIU2 RNU1-97P-201ENST00000516872 164 ntBASIC1.7□□□□□ -2.14
LINC01549A6NIU2 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 AC078814.3-201ENST00000553036 491 ntBASIC1.7□□□□□ -2.14
LINC01549A6NIU2 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 LLPHP1-201ENST00000603571 367 ntBASIC1.7□□□□□ -2.14
LINC01549A6NIU2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 MIR7975-201ENST00000619350 68 ntBASIC1.7□□□□□ -2.14
LINC01549A6NIU2 AC039056.2-201ENST00000622261 511 ntBASIC1.7□□□□□ -2.14
LINC01549A6NIU2 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 PABPC1P7-201ENST00000413177 1513 ntBASIC1.7□□□□□ -2.14
LINC01549A6NIU2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01549A6NIU2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 SNORA48.3-201ENST00000391081 134 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 PTMAP2-201ENST00000397627 327 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 RPS3AP26-201ENST00000398259 784 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 AL591416.1-201ENST00000404015 867 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 RNU2-40P-201ENST00000410833 196 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 RPA2P2-201ENST00000419698 796 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 AC048351.1-201ENST00000420064 602 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 UBE2V1P1-201ENST00000430836 445 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 RPL17P49-201ENST00000443728 411 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 RPL7P52-201ENST00000449200 742 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 AC234775.1-201ENST00000454247 670 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 HMGB3P3-201ENST00000510526 400 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 AC008716.1-201ENST00000511084 513 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 RN7SKP244-201ENST00000516513 307 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 RN7SKP40-201ENST00000517211 242 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 AP000889.2-201ENST00000532684 490 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 SNORD84-203ENST00000584275 78 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 PSMA6P4-201ENST00000603247 718 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 AC121761.2-201ENST00000617300 689 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 AC002064.3-201ENST00000623448 346 ntBASIC1.69□□□□□ -2.14
LINC01549A6NIU2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
LINC01549A6NIU2 AC244517.1-201ENST00000606030 2086 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 TANK-205ENST00000405852 2155 ntTSL 5 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 HSPE1P11-201ENST00000339579 310 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 MIR21-201ENST00000362134 72 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 RNA5SP267-201ENST00000364893 126 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AC109780.2-201ENST00000413467 845 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 MTATP6P11-201ENST00000428071 670 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AL139132.1-201ENST00000431587 344 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 HMGB1P45-201ENST00000435986 653 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AL157827.1-201ENST00000447622 132 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 SBDSP1-204ENST00000453858 737 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 ACTR3BP4-201ENST00000503033 1244 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 NAMPTP2-201ENST00000505629 1115 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AC009901.1-201ENST00000506703 541 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 HIGD1AP13-201ENST00000509878 289 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 SUB1P1-201ENST00000524415 382 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.68□□□□□ -2.14
LINC01549A6NIU2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01549A6NIU2 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms