Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RANP9-201ENST00000519957 271 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
RBFOX3A6NFN3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.58□□□□□ -2
RBFOX3A6NFN3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.58□□□□□ -2
RBFOX3A6NFN3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.58□□□□□ -2
RBFOX3A6NFN3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.58□□□□□ -2
RBFOX3A6NFN3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.58□□□□□ -2
RBFOX3A6NFN3 AC023824.3-201ENST00000569003 562 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 MTCO3P24-201ENST00000572729 782 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 BPTFP1-201ENST00000579209 492 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 MIR5187-201ENST00000583479 76 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.58□□□□□ -2
RBFOX3A6NFN3 BDH2P1-201ENST00000602288 736 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 AC006557.5-201ENST00000603126 811 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 OR4H6P-202ENST00000603819 340 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 AC005972.3-201ENST00000606304 481 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 AC092354.2-201ENST00000607786 514 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 AC069234.5-201ENST00000611056 416 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 AC034229.5-201ENST00000624258 185 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.58□□□□□ -2
RBFOX3A6NFN3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.58□□□□□ -2
RBFOX3A6NFN3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.58□□□□□ -2
RBFOX3A6NFN3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.58□□□□□ -2
RBFOX3A6NFN3 LRRC77P-213ENST00000637727 880 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 AC132825.7-201ENST00000638744 335 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.58□□□□□ -2
RBFOX3A6NFN3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
RBFOX3A6NFN3 CR383658.2-201ENST00000547576 1525 ntBASIC2.58□□□□□ -2
RBFOX3A6NFN3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RBFOX3A6NFN3 AC103988.1-201ENST00000566382 2177 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RBFOX3A6NFN3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.57□□□□□ -2
RBFOX3A6NFN3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.57□□□□□ -2
RBFOX3A6NFN3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.57□□□□□ -2
RBFOX3A6NFN3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
RBFOX3A6NFN3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RBFOX3A6NFN3 RPL23AP57-201ENST00000332361 466 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 RPL32P23-201ENST00000397237 405 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 UBE2V1P15-201ENST00000407776 448 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 RNU6ATAC-201ENST00000408749 126 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.57□□□□□ -2
RBFOX3A6NFN3 AC099677.1-201ENST00000420575 175 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 UBE2D3P2-201ENST00000424409 445 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.57□□□□□ -2
RBFOX3A6NFN3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.57□□□□□ -2
RBFOX3A6NFN3 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.57□□□□□ -2
RBFOX3A6NFN3 CDC27P1-201ENST00000445384 715 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 AC093392.2-201ENST00000450682 337 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 PRDX3P4-201ENST00000470828 747 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 AC068724.1-201ENST00000487100 792 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.57□□□□□ -2
RBFOX3A6NFN3 AC096751.1-202ENST00000502691 1067 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.57□□□□□ -2
RBFOX3A6NFN3 HMGN1P11-201ENST00000508668 303 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 RN7SKP282-201ENST00000516824 299 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 RNU1-45P-201ENST00000517191 141 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.57□□□□□ -2
RBFOX3A6NFN3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.57□□□□□ -2
RBFOX3A6NFN3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.57□□□□□ -2
RBFOX3A6NFN3 HSPE1P5-201ENST00000561489 272 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.57□□□□□ -2
RBFOX3A6NFN3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.57□□□□□ -2
RBFOX3A6NFN3 AC107982.3-201ENST00000584957 985 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 AL355810.1-201ENST00000614629 552 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 AL356321.1-201ENST00000621360 228 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 AL354798.1-201ENST00000622505 329 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.57□□□□□ -2
RBFOX3A6NFN3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.57□□□□□ -2
RBFOX3A6NFN3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RBFOX3A6NFN3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.57□□□□□ -2
RBFOX3A6NFN3 SGO1P2-201ENST00000429458 1589 ntBASIC2.57□□□□□ -2
RBFOX3A6NFN3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
RBFOX3A6NFN3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RBFOX3A6NFN3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
RBFOX3A6NFN3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.56□□□□□ -2
RBFOX3A6NFN3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.56□□□□□ -2
RBFOX3A6NFN3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.56□□□□□ -2
RBFOX3A6NFN3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RBFOX3A6NFN3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RBFOX3A6NFN3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.56□□□□□ -2
RBFOX3A6NFN3 RNA5SP119-201ENST00000362715 117 ntBASIC2.56□□□□□ -2
RBFOX3A6NFN3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.56□□□□□ -2
RBFOX3A6NFN3 MIR30B-201ENST00000384850 88 ntBASIC2.56□□□□□ -2
RBFOX3A6NFN3 RN7SKP159-201ENST00000410657 292 ntBASIC2.56□□□□□ -2
RBFOX3A6NFN3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RBFOX3A6NFN3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.56□□□□□ -2
RBFOX3A6NFN3 MRPL50P2-201ENST00000416821 482 ntBASIC2.56□□□□□ -2
RBFOX3A6NFN3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.56□□□□□ -2
RBFOX3A6NFN3 HSPE1P1-201ENST00000421494 318 ntBASIC2.56□□□□□ -2
RBFOX3A6NFN3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.56□□□□□ -2
RBFOX3A6NFN3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.56□□□□□ -2
RBFOX3A6NFN3 SNRPEP4-201ENST00000435815 279 ntBASIC2.56□□□□□ -2
RBFOX3A6NFN3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.56□□□□□ -2
RBFOX3A6NFN3 AC005002.1-201ENST00000447458 540 ntBASIC2.56□□□□□ -2
RBFOX3A6NFN3 AL359073.1-201ENST00000448036 403 ntBASIC2.56□□□□□ -2
RBFOX3A6NFN3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.56□□□□□ -2
RBFOX3A6NFN3 AL136126.1-201ENST00000473603 402 ntBASIC2.56□□□□□ -2
RBFOX3A6NFN3 AP004217.1-201ENST00000480579 346 ntBASIC2.56□□□□□ -2
RBFOX3A6NFN3 VPS26AP1-201ENST00000483197 979 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms