Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RN7SKP96-201ENST00000516948 297 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 SCARNA20.6-201ENST00000517251 106 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 HIGD1AP6-201ENST00000521833 279 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 HMGB1P1-201ENST00000522557 636 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AP002404.1-201ENST00000532005 451 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AC087894.1-201ENST00000538359 518 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AL365503.1-201ENST00000605247 905 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 RMST_8.1-201ENST00000610287 165 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AL133445.2-201ENST00000611191 527 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AC135507.2-201ENST00000612443 309 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 VN1R7P-201ENST00000619242 903 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AL049777.1-201ENST00000622740 518 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 XPOTP1-201ENST00000443317 2398 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 RNU6-619P-201ENST00000365146 108 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 RNU6-356P-201ENST00000384140 107 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 RNU6-1257P-201ENST00000384625 110 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 SNORD67-201ENST00000390833 111 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 SFR1P1-201ENST00000403720 688 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 RNU6-575P-201ENST00000411326 105 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 OR51A3P-201ENST00000413596 924 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 UBE2V1P9-201ENST00000414760 368 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AC009237.2-201ENST00000421358 284 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AL513175.1-201ENST00000431492 780 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AC010881.1-201ENST00000433830 235 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AC244505.3-201ENST00000454598 187 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 RNA5SP309-201ENST00000516670 106 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 CENPUP2-201ENST00000555897 1186 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 VN1R87P-201ENST00000596706 487 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AF131215.7-201ENST00000602443 707 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AC002487.1-201ENST00000604565 994 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AC011816.2-201ENST00000607089 556 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AC092953.2-201ENST00000608000 699 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 AC018645.2-201ENST00000609151 472 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 ATP5A1P2-202ENST00000616464 443 ntBASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.34□□□□□ -1.87
SMIM28A0A1B0GU29 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.34□□□□□ -1.88
SMIM28A0A1B0GU29 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SMIM28A0A1B0GU29 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 RNU1-75P-201ENST00000347264 129 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 MIR16-1-201ENST00000385271 89 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 DSTNP4-201ENST00000399472 474 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC110754.1-201ENST00000399740 601 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 Z98941.1-201ENST00000407764 100 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 RPL35AP12-201ENST00000425362 338 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC011242.1-201ENST00000433596 1158 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 RNF2P1-201ENST00000442955 1010 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 TVP23BP2-201ENST00000455082 615 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC005351.1-201ENST00000511152 786 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC119751.1-201ENST00000513357 765 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 RN7SKP234-201ENST00000517173 224 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC009812.2-201ENST00000517657 457 ntBASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.33□□□□□ -1.88
SMIM28A0A1B0GU29 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms